Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0493 ATGTCCCAGTTTTGCCGAGAAGCTTGTCACTCCACCACCCTGCAGTGGCGGTTTAAGTACCGTGTCTCGGTGCTACGGCGGTCACTCCTCCGATTCCTCCACAGCTTTATGATTTGCTCTGGAAGGAAGCATACTAATTCCACGTACCGCATGCTGCAGTCGCATGCAGCATTGCCTTCTCCGCCGCCGCAGCCGCCGATAGATTTCTCCGACGAGGCTAGCCTTGAAGCGTTGCCGGTTACCTTACCACCTCCCCTGTTTAATACCCATGATTTGGATTCTGATTTGGTTTCCTTGAAGATCACTTTGTTAGGTGATTGTCAAATTGGAAAAACCAGCTTTTTGGTGAAATATGTTGGGGATGTAAAAGATCAACAAGGGCGACAGGGTAAAGGGCCAAATCAAATGGACAAGATTTTGGATGTAAGAGGAGCACGAATATCGTATTGTATTTGGGAGGTACAAGGTGATCGAAAATCAGAAGAACAAATTCCAATGGCTTGCAATGACTCAGTGGCAATTTTGATCATGTTTGATCTGACAAGTCGATGCACTTTAAACAGTGTCCCTAGATGGTACAAAGAAGCCAGGAAATGGAATCAGACAGCAATTCCAGTGTTGATAGGAACCAAATTTGATGATTTCATTCAGCTCCCAATTGATTTGCAATGGACCATCGCCAGTCAGGCAAGAGCATATGCAAAGGCCCTGAATGCAACGTTGTTCTTTTCAAGTGCAACCTACAACATCAACGTGAACAAGATCTTCAAGTTCATTACTGCAAAACTCTTCGATCTACCATGGACAGTAGAAAGAAATTTAACAGTTGGGGAACCAATTATTGATTTCTAA 852 0.4437 MSQFCREACHSTTLQWRFKYRVSVLRRSLLRFLHSFMICSGRKHTNSTYRMLQSHAALPSPPPQPPIDFSDEASLEALPVTLPPPLFNTHDLDSDLVSLKITLLGDCQIGKTSFLVKYVGDVKDQQGRQGKGPNQMDKILDVRGARISYCIWEVQGDRKSEEQIPMACNDSVAILIMFDLTSRCTLNSVPRWYKEARKWNQTAIPVLIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKIFKFITAKLFDLPWTVERNLTVGEPIIDF 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0493 283 PRINTS Transforming protein P21 ras signature 99 120 - -
Lal1g0493 283 PRINTS Transforming protein P21 ras signature 140 162 - -
Lal1g0493 283 PRINTS Transforming protein P21 ras signature 201 214 - -
Lal1g0493 283 PRINTS Transforming protein P21 ras signature 241 263 - -
Lal1g0493 283 PANTHER MONOMERIC G-PROTEIN 61 282 - -
Lal1g0493 283 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 99 274 IPR027417 -
Lal1g0493 283 Gene3D - 91 273 IPR027417 -
Lal1g0493 283 SMART rab_sub_5 99 266 - -
Lal1g0493 283 Pfam Ras family 100 263 IPR001806 GO:0003924|GO:0005525
Lal1g0493 283 ProSiteProfiles small GTPase Rab1 family profile. 93 283 - -
Lal1g0493 283 PANTHER - 61 282 - -
Lal1g0493 283 SMART rho_sub_3 101 265 IPR001806 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0493 Lal-Chr1 3119449 3122420 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0493 K07976 - gmx:100780638 397.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0493 1 3119449 3122420 Lal9g0386 9 2553429 2557664 LSH