Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0374 ATGAGTTTGAAAAGTAGAGTAGAGGTTTCTTCTAGAAGCGTTATATCTCAGAGATGGACACTTTTGCTCTGCTTAGGAAGCTTCTGTGCTGGGATGTTCTTCACCACCAGGATGTGGGCTATTCCTGAGCCTAAAGGACTAGCACGAGTAACATCTTCAGAAGCTGAAAATTTGAATGTAGTATCAGAGGGTTGTAATTCTAGAATTTTGCAAGAGATGGAAATAAAGCCTGAAACAACAGACATCTATAGGGAAGCTTTCAAGAGTCATAATCCCATTGAAACCTTGGACAAGACTATTGCAAATTTAGAGATGGAGTTAGCCACAGCAAGGGCAGCTCAAGAGTCTATACGAAATGGTGCTCCTGTTTCAGAAGATATAAGGTTAACTGAATCATCTGGCAAGAGAAAGTACCTAATGGTCGTAGGTATTAATACTGCATTTAGCAGCCGAAAAAGAAGAGACTCACTTCGTGAAACCTGGATGCCACGAGGTGAGAAGAGAAAGAAGCTAGAGGAAGAGAAAGGCATTATCATGCGTTTTGTAATTGGACACAGTGCTACGTCAGGCGGTATTTTAGACAGAGCCATTGAAGCAGAGGACAGAAAGCATGGAGATTTCTTGAGGCTGAATCATGTAGAAGGATACCTTGAATTGTCAGCAAAGACAAAGACATACTTTGCCACTGCTGTGAACTTGTGGGATGCAGACTTCTATGTCAAAGTTGATGATGATATTCATGTAAATATAGCGACACTTGGAGAAACTCTAGCTAGACACCGATCAAAACCAAGGATATACATGGGTTGCATGAAATCTGGACCAGTCCTATCTCAGAAAGGGGTAAGGTACCATGAACCTGAACATTGGAAGTTTGGCGAGTCAGGAAACAGGTACTTCCGTCATGCCACAGGACAGTTGTATGCCATTTCAAACGATCTGGCTTCATACATTGCACTAAACCAGGATCTTCTTCACAAGTATGCCAATGAGGATGTGTCACTAGGGTCTTGGTTCATTGGACTTGATGTGGAACACATAGATGATAGAAGACTATGTTGTGGCACTCCTCCAGATTGTGAATGGAAGGCTCAGGCTGGCAACATTTGTGTTGCTTCATTTGATTGGACCTGCAGTGGGATTTGTAGGTCAGCTGAGAGAATGAAAGAGGTACATAGGAGGTGTGGGGAAGGTGAAAATGCTTTATGGAGTGCCACTTTCTAG 1224 0.4265 MSLKSRVEVSSRSVISQRWTLLLCLGSFCAGMFFTTRMWAIPEPKGLARVTSSEAENLNVVSEGCNSRILQEMEIKPETTDIYREAFKSHNPIETLDKTIANLEMELATARAAQESIRNGAPVSEDIRLTESSGKRKYLMVVGINTAFSSRKRRDSLRETWMPRGEKRKKLEEEKGIIMRFVIGHSATSGGILDRAIEAEDRKHGDFLRLNHVEGYLELSAKTKTYFATAVNLWDADFYVKVDDDIHVNIATLGETLARHRSKPRIYMGCMKSGPVLSQKGVRYHEPEHWKFGESGNRYFRHATGQLYAISNDLASYIALNQDLLHKYANEDVSLGSWFIGLDVEHIDDRRLCCGTPPDCEWKAQAGNICVASFDWTCSGICRSAERMKEVHRRCGEGENALWSATF 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0374 407 Coils Coil 93 113 - -
Lal9g0374 407 Gene3D - 135 352 - -
Lal9g0374 407 PANTHER BETA-1,3-GALACTOSYLTRANSFERASE 4-RELATED 8 399 - -
Lal9g0374 407 Pfam Galactosyltransferase 152 349 IPR002659 GO:0006486|GO:0016020|GO:0016758
Lal9g0374 407 Pfam Domain of unknown function (DUF4094) 16 112 IPR025298 -
Lal9g0374 407 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 8 399 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0374 Lal-Chr9 2481788 2485840 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0374 1 407 Glycosyltransferase AT1G05170 75.676 0.0 677
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0374 K20855 - gmx:100776912 712.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0374 9 2481788 2485840 Lal9g0374 9 2481788 2485840 ECH
Lal1g0495 1 3168622 3172719 Lal9g0374 9 2481788 2485840 LSH
Lal25g0051 25 379051 383485 Lal9g0374 9 2481788 2485840 PCT
Lal9g0374 9 2481788 2485840 Lal25g0051 25 379051 383485 PCT