Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0051 ATGAATTTGAAAAGCAGAGGAGATGTGCCTGTAAGAAGTGTTATTTCCCAGAAATGGATGATTTTGTTATGTATTGGAAGCTTTTGTGCTGGGATGTTCTTCACAAACAGGATGTGGACTATTCCTGAGCCTAAAGGATTTGCACGGACAACAACTATGGAAGCTGAAAAATTGAATTTAGTTTCAGAGGATTGTCATTCAAGAATTTTGCAAGAGAAGGAAGTGAAGCGTGAAACCAAAAACATCTATAGGGAAGTTTCCAAGACACATAATGCTATACAAACGTTGGACAAGACTATTTCAAACTTAGAGATGGAATTAGCTGCTGCAAAATCAGCACAGGAGTCTATAAGAAGTGGTGCTCCTGTGTCACAAGATATAAAGATGAATGAATCATCATATAGTAAGAGAAGGTATCTAATGGTCATAGGAATTAATACTGCTTTTAGTAGCAGGAAAAGAAGGGACTCAATTCGTGCAACATGGATGCCACAAGGTGAAAAGAGAAAGAAGCTAGAGGAAGAGAAAGGCATTATCATCCGCTTTGTAATTGGTCACGGGGCTACATCAGGGGGTATCCTAGACAGATCAATTGAAGCAGAAAATGCAAAACATGGAGATATCCTGAGGCTGGATCATGTTGAAGGATACCTTGAATTATCAGCAAAGACAAAGACCTACTTTGCCACTGCTGTTAATTTATGGGATGCTGACTTCTATATCAAAGTTGATGATGATGTCCATGTAAATATAGCAACATTGGGAGCAACTCTAGTTAGACATCGATCGAAACCTCGGGTATACATTGGATGCATGAAATCTGGTCCAGTTCTTAATCAAAAAGGAGTAAGGTACCATGAACCAGAATATTGGAAATTTGGTGAGACTGGAAACAAGTATTTTCGTCACGCCACAGGACAGTTGTATGCTATTTCAAAAGATTTGGCTACATACATTTCAACTAACCAGCATGTTCTTCATAAGTATGCCAATGAAGATGTTTCATTAGGTGCTTGGTTTATTGGACTTGATGTGAATCATATAGATGATAGGAGACTCTGCTGTGGTACACCACCAGATTGTGAATGGAAGGCCCAAGCAGGGAATGTTTGTGTAGCTTCATTTGATTGGACTTGCAGTGGAATTTGTAGGTCAGCTGAGAGGATCAAAGAGGTCCATAAGAGATGTGGTGAAGGTGAGAAAGCTTTGTGGAGTGCCACTTTCTAA 1227 0.3945 MNLKSRGDVPVRSVISQKWMILLCIGSFCAGMFFTNRMWTIPEPKGFARTTTMEAEKLNLVSEDCHSRILQEKEVKRETKNIYREVSKTHNAIQTLDKTISNLEMELAAAKSAQESIRSGAPVSQDIKMNESSYSKRRYLMVIGINTAFSSRKRRDSIRATWMPQGEKRKKLEEEKGIIIRFVIGHGATSGGILDRSIEAENAKHGDILRLDHVEGYLELSAKTKTYFATAVNLWDADFYIKVDDDVHVNIATLGATLVRHRSKPRVYIGCMKSGPVLNQKGVRYHEPEYWKFGETGNKYFRHATGQLYAISKDLATYISTNQHVLHKYANEDVSLGAWFIGLDVNHIDDRRLCCGTPPDCEWKAQAGNVCVASFDWTCSGICRSAERIKEVHKRCGEGEKALWSATF 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0051 408 Pfam Domain of unknown function (DUF4094) 16 113 IPR025298 -
Lal25g0051 408 Coils Coil 93 113 - -
Lal25g0051 408 PANTHER HEXOSYLTRANSFERASE 8 400 - -
Lal25g0051 408 Pfam Galactosyltransferase 153 350 IPR002659 GO:0006486|GO:0016020|GO:0016758
Lal25g0051 408 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 8 400 IPR002659 GO:0006486|GO:0016020|GO:0016758
Lal25g0051 408 Gene3D - 131 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0051 Lal-Chr25 379051 383485 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0051 1 408 Glycosyltransferase AT1G05170 78.186 0.0 693
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0051 K20855 - gmx:100793931 749.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0051 25 379051 383485 Lal25g0051 25 379051 383485 ECH
Lal25g0051 25 379051 383485 Lal1g0495 1 3168622 3172719 PCT
Lal25g0051 25 379051 383485 Lal9g0374 9 2481788 2485840 PCT
Lal1g0495 1 3168622 3172719 Lal25g0051 25 379051 383485 PCT
Lal9g0374 9 2481788 2485840 Lal25g0051 25 379051 383485 PCT