Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0360 ATGGCCATGGATGCCATTACCATCATCCATGCCATCTTCACCATTATCTTCTTCCTTCCCATCACCACATTCTCAATCTCATCAACGTCTCAGTCTCAGATCAACTCTAACTCTATCCTTGTTGCTCTGTTAGATTCTCATTACACTGAACTTGCTGAGCTTGTAGAAAAGGCTATGCTTCTTCAGAAACTTGAAGACACTGTTTCAGCTCACAATATTACCATTTTAGCCCCCAAAAATAAAGCTTTTTTTGACCCAGATTTCAAGCGTTTCCTTCTAGAACCTCGAAATCTGAATTCCCTCCAAACCCTTCTCATGTCACATATAATCCCTACCCGAATCGGATCAAAAACCGGCTCATCCCGCCACCGCACCCTCGCCGGTGATCACCACCATATCCGCCTTGAAACCAATTCCACAACCACCGACACTCAATGGACTGTCGACGGCGCTTGTATTACGCACCCCGACGCCGTGACCCGACCCGACGGTGTCATCCACGGCATTGACCACCTCCTTGTCCCACGCTCCGTCCAAGACAACTTCAACAGCCGCCGTAGCCTCCGGTCAATCTCTGCCGTGAAACCCGAAGGAGCACCTGATGTGGACCCGAGAACCCACCGCCTCAAGAAACCAGCGCCACCGTCAAATCCCGGTTCTCAACCGGCGCTACCAATATCCGACGCATTAGCACCAGGGCCAGCAATATCCCCAGCACCTGCGCCGGGTCCTGGAGGGCCTCAGCACCATTTCAACGGCGAGTCTCAGGTGAAGGATTTCATCCAAACCCTACTCCAATACGGCGGTTACAACGAGATGGCGGACATTCTCGTAAACCTGACGTCACTCGCCACCGAGATGGGGCGGTTAGTATCAGAGGGTTACGTTTTAACGGTTCTGGCTCCTAATGATGAAGCAATGGCGAAATTAACAACAGACCAATTAAGTGAACCGGGTTCACCCGAACAAATCATGTATTACCATCTTATACCGGAGTATCAAACCGAAGAGAGTATGTATAATTCTGTTAGAAGGTTCGGGAAGGTTCATTATGATACACTCCGTGTGCCACATAAGATGGTGGCTCAGGAGGCTGATGGGTCGGTTAAATTCGGAAACGGTGATGGTTCGGCTTATTTATTCGACCCGGATATTTATACCGATGGCCGGATCTCTGTTCAGGGGATTGATGGGGTGTTGTTTCCTTTAGAGGAGGTGAAGGATGTGACCCGGGTTAAAGTGGGTCAACCCGTTAAGGATGTGGTCAAGCAGAGAAGAGGAAAATTGATGGAAGCAACATGCTGGATGCTAGGAACCATTGGACAGCATTCTAGCTTCACCTCTTGCCAATAA 1353 0.4952 MAMDAITIIHAIFTIIFFLPITTFSISSTSQSQINSNSILVALLDSHYTELAELVEKAMLLQKLEDTVSAHNITILAPKNKAFFDPDFKRFLLEPRNLNSLQTLLMSHIIPTRIGSKTGSSRHRTLAGDHHHIRLETNSTTTDTQWTVDGACITHPDAVTRPDGVIHGIDHLLVPRSVQDNFNSRRSLRSISAVKPEGAPDVDPRTHRLKKPAPPSNPGSQPALPISDALAPGPAISPAPAPGPGGPQHHFNGESQVKDFIQTLLQYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGSPEQIMYYHLIPEYQTEESMYNSVRRFGKVHYDTLRVPHKMVAQEADGSVKFGNGDGSAYLFDPDIYTDGRISVQGIDGVLFPLEEVKDVTRVKVGQPVKDVVKQRRGKLMEATCWMLGTIGQHSSFTSCQ 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0360 450 Pfam Fasciclin domain 47 175 IPR000782 -
Lal9g0360 450 Pfam Fasciclin domain 282 402 IPR000782 -
Lal9g0360 450 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 11 450 - -
Lal9g0360 450 SUPERFAMILY FAS1 domain 236 403 IPR036378 -
Lal9g0360 450 Gene3D FAS1 domain 248 402 IPR036378 -
Lal9g0360 450 Gene3D FAS1 domain 22 176 IPR036378 -
Lal9g0360 450 ProSiteProfiles FAS1/BIgH3 domain profile. 35 173 IPR000782 -
Lal9g0360 450 SUPERFAMILY FAS1 domain 37 176 IPR036378 -
Lal9g0360 450 SMART fasc_3 74 176 IPR000782 -
Lal9g0360 450 SMART fasc_3 298 403 IPR000782 -
Lal9g0360 450 MobiDBLite consensus disorder prediction 187 253 - -
Lal9g0360 450 ProSiteProfiles FAS1/BIgH3 domain profile. 257 385 IPR000782 -
Lal9g0360 450 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 11 450 IPR044654 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0360 Lal-Chr9 2404035 2408225 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0360 - - adu:107477699 639.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0395 2 2383616 2387811 Lal9g0360 9 2404035 2408225 LSH