Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0395 ATGGCTATGAATGTGATCTTCATCATTCTCCTTCTTCTTCCCATAACCACATTCTCAATGCCTCAGTCTCAGATAAACTCTAACTCCATCCTCGTTGCTCTATTGGACTCTCATTACACTGAACTCGCTGAGCTTGTTGACAAGGCCATGCTTCTTCACAAACTTGAAGATACTGTTTCCATTCACAATATTACCATTTTTGCACCCAAAAATGAAGCTTTTCGAGACCCACATTTCAAGCTCTTCCTTCTTCAACCTCGAAATCTTATTTCCCTCCAAACCCTTCTTTTGTCACATATCATCCCAACCCGGATCGCTTCCAAAACCGACTCAACCCGCCACCGCACCCTTGCCGGTGACCACCACCATATCCGCCTCCAAACCAATTCCTCAGCCGCCACCACACAATGGACTGTCGACGGCGCGTGTGTTACACACCCCGACGCCGTGACCCGACCCGACGGTGTAATCCACGGTATTGACCAGCTTCTAGTTCCGCGCTCCGTCCAAGACGACTTCAATCGCCGCCGTAGCCTCCGCTCAATCTCCGCCGTGAAACCTGAAGGAGCACCCGAAGTAGACCCAAGAACCCACCGCCTCAAGAAACCAGCCCCTCCGTCAAAACCAGGTTCTCCTCCGGCACTGCCAATCTCCGACGCATTAGCACCAGGACCATCAATCTCCCCTGCACCGGCACCGGGTCCCGGAGGGCCTCAACACCACTTCAACGGCGAGGCTCAGGTGAAGGGTTTCATTCAAACCCTACTCCAATACGGCGGTTACAACGAAATGGCGGACATTCTGGTAAACCTGACATCACTCGCCACCGAGATGGGTAGGTTGGTATCGGAGGGTTATGTTTTAACGGTTCTAGCTCCGAACGATGAAGCAATGGCGAAATTAACAACAGACCAATTAAGTGAACCGGGTTCACCGGAACAGATCATGTATTACCATCTCATACCGGAGTATCAGACCGAAGAGAGTATGTATAATTCTGTTAGAAGGTTCGGGAAGGTTCAGTATGAAACACTTCGTGTGCCGCATAAGGTGGTGGCTCAAGAAGCTGATGGGTCGGTTAAGTTTGGGAATGGTGATGGGTCGGCTTATTTGTTCGACCCGGATATTTATACCGATGGCCGGATCTCCGTTCAGGGAATTGATGGGGTTTTGTTTCCCATGGAGGAGGAAGAGGATGCGAATCGGGCTAAACCGGGTAAACCCACTAAGGTTGTGACTGTCAAGCAGAGGAGAGGTTTACCATTTCCTACGAAAATCATTACAGTGACAATTTCTACTTTGTGCATGCTTGGGGAAAATAGGAAAATTGTTAGAAGCGACATGCTGGATGCTAGGAACCATTGGACAGCATTCTAG 1377 0.4975 MAMNVIFIILLLLPITTFSMPQSQINSNSILVALLDSHYTELAELVDKAMLLHKLEDTVSIHNITIFAPKNEAFRDPHFKLFLLQPRNLISLQTLLLSHIIPTRIASKTDSTRHRTLAGDHHHIRLQTNSSAATTQWTVDGACVTHPDAVTRPDGVIHGIDQLLVPRSVQDDFNRRRSLRSISAVKPEGAPEVDPRTHRLKKPAPPSKPGSPPALPISDALAPGPSISPAPAPGPGGPQHHFNGEAQVKGFIQTLLQYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGSPEQIMYYHLIPEYQTEESMYNSVRRFGKVQYETLRVPHKVVAQEADGSVKFGNGDGSAYLFDPDIYTDGRISVQGIDGVLFPMEEEEDANRAKPGKPTKVVTVKQRRGLPFPTKIITVTISTLCMLGENRKIVRSDMLDARNHWTAF 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0395 458 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 6 420 - -
Lal2g0395 458 Gene3D FAS1 domain 240 393 IPR036378 -
Lal2g0395 458 SMART fasc_3 289 394 IPR000782 -
Lal2g0395 458 SMART fasc_3 65 167 IPR000782 -
Lal2g0395 458 ProSiteProfiles FAS1/BIgH3 domain profile. 248 376 IPR000782 -
Lal2g0395 458 SUPERFAMILY FAS1 domain 28 167 IPR036378 -
Lal2g0395 458 MobiDBLite consensus disorder prediction 180 243 - -
Lal2g0395 458 ProSiteProfiles FAS1/BIgH3 domain profile. 26 164 IPR000782 -
Lal2g0395 458 Pfam Fasciclin domain 273 393 IPR000782 -
Lal2g0395 458 Pfam Fasciclin domain 38 166 IPR000782 -
Lal2g0395 458 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 6 420 IPR044654 -
Lal2g0395 458 Gene3D FAS1 domain 31 167 IPR036378 -
Lal2g0395 458 SUPERFAMILY FAS1 domain 227 394 IPR036378 -
Lal2g0395 458 MobiDBLite consensus disorder prediction 205 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0395 Lal-Chr2 2383616 2387811 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0395 - - adu:107477699 591.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0395 2 2383616 2387811 Lal9g0360 9 2404035 2408225 LSH