Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0359 ATGGCTTTCCCTCGGGCTGTAGCCATTGTATCCCTGTTGTTCGCTCTGTATTGTGGTCTTGACCCATTTCATCACAGCCCCATAGCCAACTTCCCTGATTTCGAGGCCAAAAAGGTTGACATGCCCCCATGGTCCCAGGTTCCAACCGACCAAGACAAACATAACTTGTTGCAAAATTCAGAGATTAAATTCCTTAACGAAGTTCATGGACCAGAAAGTATTGTCTTTGACCCTCTTGGTCGTGGCCCTTACACTGGTGTTGCTGATGGCACTGTTCTCTTCTGGAATGGTAACTCTTGGCTTCCCTTTGCTTTTACCTCTCCCAACAGGTCAGAACTATGTAATCCTGTAGCAAATGCATCACCATTTAGTTATGTGAAAACTGAGCACATCTGTGGAAGACCTTTGGGACTCAGATTTGACAAGAAAACAGGTGATTTGTATATTGCAGATGCATATTTTGGGCTGTTGAAGGTAGGCCCCGAGGGTGGTTTAGCGGAATCTCTGGTAACTGAGGCTGAAGGGGTGCCACTGAGATTTACTAATGATGTTGATGTTGATTCAGAAGGGAATGTTTATTTTACAGAGAGCAGTGTTAATTACCAGAGAAGGGACTTCCTTCAGCTGGTATTCTCCGGGGATGATAGTGGCAGGGTTTTGAAATACAACCCCGCCACCAAGAAAACCACTGTTCTTGAAAGGAACATTCAATTTCCAAATGGCATTTCCTTGAGCAAGGATGGGTCCTTCTTTGTCTTTTGTGAAGGGGTTGTTGGCAGGTTGCGCAAATACTGGCTGAAAGGAGATAAAGCTGGGACTTCCGAGATTTTTGCCATCCTCCCAGGATATCCTGACAATGTGAGAGTCAATGAAAATGGCGATTTTTGGGTGGCACTTCATTCTAGAAGGTATATGTATGCTTACCTTCATGGTCTATACCCAAAGATTAGGAAAGCCATACTCAAGCTCCCTATACCAGCCAAGATTCAATACCTGCTTCAAATCGGAGGACGGCCACATGCAGCCATTGTTAAATATAGCCCTGAAGGTAAAGTTGTGCAGATATTAGAGGACAGTCAGGGAAAAGTTGTTAGAGCAGTGAGTGAAGTGGAGGAGAAGGATGGTAAACTTTGGATAGGAAGTGTTCTCATGCCTTTTATTGCAGTTTACAATTTGACATCAACCAACTAA 1191 0.4416 MAFPRAVAIVSLLFALYCGLDPFHHSPIANFPDFEAKKVDMPPWSQVPTDQDKHNLLQNSEIKFLNEVHGPESIVFDPLGRGPYTGVADGTVLFWNGNSWLPFAFTSPNRSELCNPVANASPFSYVKTEHICGRPLGLRFDKKTGDLYIADAYFGLLKVGPEGGLAESLVTEAEGVPLRFTNDVDVDSEGNVYFTESSVNYQRRDFLQLVFSGDDSGRVLKYNPATKKTTVLERNIQFPNGISLSKDGSFFVFCEGVVGRLRKYWLKGDKAGTSEIFAILPGYPDNVRVNENGDFWVALHSRRYMYAYLHGLYPKIRKAILKLPIPAKIQYLLQIGGRPHAAIVKYSPEGKVVQILEDSQGKVVRAVSEVEEKDGKLWIGSVLMPFIAVYNLTSTN 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0359 396 PANTHER STRICTOSIDINE SYNTHASE-RELATED 7 392 - -
Lal9g0359 396 Pfam Strictosidine synthase-like, N-terminal 57 94 - -
Lal9g0359 396 PANTHER STRICTOSIDINE SYNTHASE TRANSCRIPTION FACTOR WD40-LIKE FAMILY-RELATED 7 392 - -
Lal9g0359 396 Gene3D - 54 396 IPR011042 -
Lal9g0359 396 SUPERFAMILY Calcium-dependent phosphotriesterase 46 392 - -
Lal9g0359 396 Pfam Strictosidine synthase 182 268 IPR018119 GO:0009058|GO:0016844
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0359 Lal-Chr9 2399591 2408225 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0359 - - gmx:100803331 698.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0394 2 2378848 2383091 Lal9g0359 9 2399591 2408225 LSH