Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0394 ATGGCTCTGCTTCTACCTCTAGCTATTATATTCCTTTTTTTTGCTCTCTACTGTGGCCTTGACCCATTTCAACACAGCCCTATAGCCAACTTCCCTGATTTTGAGGCCAAAAAAGTACACATGCCCCCTTCATCTCAGCTTCCAACGGAACAAGACAAACATAACTTGTTGCAAAATTCAGAGATTAAATTCCTTAACCAAGTTCAGGGTCCAGAGAGTCTTGTCTTCGATCCTCTAGGTCGTGGCCCTTATACTGGTGTTGCTGATGGCAGAATTCTCTTCTGGAATGGAAACTCTTGGCTTCATTTTGCTTCTACCTCCCCCAACAGGTCAGAGCTATGTAATCCAATAGCCTCTGCAATACCATTTAGTTATGTGAAGACTGAGCACATCTGTGGAAGGCCTTTGGGACTCAGATTTGATAAGAAAACAGGTGATTTGTATATTGCAGATGCATATTTTGGGCTGTTGAAGGTGGGGCCTGAGGGTGGTTTAGCAACATCTCTTGTAACTGAGGCTGAAGGTGTGCCACTAAGATTTACTAATGATGTTGATGTTGATTCAGAAGGGAATGTTTATTTTACAGAGAGCAGTGCTAATTATCAGAGGAGGAATTTCATTCAGCTGGTGTTTTCCGGTGATGATAGTGGCAGGGTTTTGAAATACAATCCTGCTTCCAAGGAAACCACTGTTCTTGTGAGGAACATTCAGTTTCCAAATGGCATTTCTTTGAGCAAGGATGGTTCCTTCTTTGTCTTTTGTGAAGGGGTTATTGGCAGGTTAAGTAAATACTGGCTGAAAGGAGATAAGGCTGGGACTTCTGAGATCTTTGCTATCCTACCTGGATTTCCTGACAATGTGAGAGTCAATGAAAATGGTGATTTTTGGGTGGCACTTCATTGTAGAAGGTATATGTATGCTTACCTTCTTGGTCTCTACCCAAAGATTAGGAAAGCAATACTCAGGCTTCCTATACCAACCAAGATCCAGTACCTGCTTCAAATCGGAGGCCGGCTACATGCCGCTATTGTTAAGTATAGCCCGGAAGGTAAACTTGTGCAGATATTGGAGGACAGTCAGGGAAAAGTTGTTAGAGCAGTTAGTGAAGTGGAGGAAAAAGATGGTAAGCTATGGATAGGAAGTGTTCTCATGCCCTTTGTTGCAGTTTACAACTTGGCATGA 1182 0.4272 MALLLPLAIIFLFFALYCGLDPFQHSPIANFPDFEAKKVHMPPSSQLPTEQDKHNLLQNSEIKFLNQVQGPESLVFDPLGRGPYTGVADGRILFWNGNSWLHFASTSPNRSELCNPIASAIPFSYVKTEHICGRPLGLRFDKKTGDLYIADAYFGLLKVGPEGGLATSLVTEAEGVPLRFTNDVDVDSEGNVYFTESSANYQRRNFIQLVFSGDDSGRVLKYNPASKETTVLVRNIQFPNGISLSKDGSFFVFCEGVIGRLSKYWLKGDKAGTSEIFAILPGFPDNVRVNENGDFWVALHCRRYMYAYLLGLYPKIRKAILRLPIPTKIQYLLQIGGRLHAAIVKYSPEGKLVQILEDSQGKVVRAVSEVEEKDGKLWIGSVLMPFVAVYNLA 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0394 393 PANTHER STRICTOSIDINE SYNTHASE-RELATED 8 392 - -
Lal2g0394 393 SUPERFAMILY Calcium-dependent phosphotriesterase 51 391 - -
Lal2g0394 393 Pfam Strictosidine synthase 182 268 IPR018119 GO:0009058|GO:0016844
Lal2g0394 393 Pfam Strictosidine synthase-like, N-terminal 57 94 - -
Lal2g0394 393 Gene3D - 54 393 IPR011042 -
Lal2g0394 393 PANTHER STRICTOSIDINE SYNTHASE TRANSCRIPTION FACTOR WD40-LIKE FAMILY-RELATED 8 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0394 Lal-Chr2 2378848 2383091 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0394 - - gmx:100803331 688.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0394 2 2378848 2383091 Lal9g0359 9 2399591 2408225 LSH