Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0353 ATGAAATGGGAAGTGTTAGGAATTGAAGGTTGCGTATCCTGTCATATAAAATTGGGTTGGAGTGGAAAAGAAACAGATAAGAGGTTGATTGCAATGGGAAAGAAGGAGAAAACAGGACTTGGCAGGTCCCTGGTTAAACAACACAACCATATGATCGAAGAGACAAAGGAGAAGGGTCGTATATACAAGAAGAAGTTTCTAGAATCATTCACGGAAGTTACTGACATCGACACCATCATCGAACAATCTGAAAACCCCGAATTCCAATCAGATCTCCCTGGACCTACTACCTTGGCATCAATCTTATCTGGGTCTATTGGGATGACGCCTGAAGAGTTGAGGAAGCAGCAGAGGAGAGAGGAGGCACTACATGCTACCAGTCTCAGAGCATCTTCTCCTTTTCATTATCATATTTGTTTCATTGGTTTGCCACAACAACTCCTTTGTTTTATTAGGCCACCGTGGACCTCACACATGTCTCTCCAGAAGCTTGATGCTAATGAAAGACAATCTTTCTTGAATTGGCGTCGCAACCTAGCAAGGCTTGAGGAAAATAAGACCCTTGTCCTTACCCCATTTGAGAAAAATATTGATATCTGGAGACAGCTCTGGCGGGTTGTCGAACGCAGTGACTTGCTTGTTATGGTCGTTGATTCACGAGATCCTCTGTTCTATCGCTGTCCTGATCTTGAGGCTTATGCACGGGAGGTTGATGAGCATAAACGCACATTGCTTTTGGTTAACAAGGCAGATCTTTTACCTGAATCTATCAGAGAGAAATGGGCAGAATATTTTCGTGCTCATGATATTCTCTTCATCTTCTGGTCAGCTAAAGCTGCTACTGCAGCTCTGGAAGGCAAGAAGCTAGGTTCATCATGGGAGGCTGATAACTTGGGGAGAACCGATAACCCAGACACAAAGATATATGGAAGGGATGAGCTTTTAGCCCGCTTGCAATCAGAAGCACAGGAAATAGTTGAAAGGAGGAGAAATTCGGGCTCCTCTGATACAAGGCATTCCAAGGTTAAATCTCCTGGCGAAAATGCTGCTGGTAGTTCGTCATCAAGTAATGTAATTGTGGGGTTTGTTGGATATCCTAATGTTGGGAAAAGCTCAACTATTAATGCTCTGGTTGGTCAAAAGCGGACTGGTGTCACCTCTACTCCAGGGAAAACAAAGCATTTCCAGACATTAATTATTTCTGACAAGCTGACCCTTTGTGACTGTCCTGGATTAGTTTTTCCATCTTTCTCAAGCTCAAGATTCGAGATGATTGCTTCTGGAGTGTTGCCTATTGATAGGATGACTGAACACAGGGAATCTATCCAAGTTGTAGCTGATAGAGTCCCAAGACATGTCATAGAAGCGACTTATAAGATCAAGCTTCCTAAACCTAAGCCATATGAGTCCCAATCTCGTCCCCCTCTGGCATCTGAACTTCTGAGAGCGTATTGTGCTTCTCGTGGGCATGTTGCCTCCAGCGGACTTCCTGATGAAACCAGGGCTTCCCGTCAGATTCTGAAAGATTACATTGATGGGAAGCTGCCTCACTATGCGATGCCCCCTGCCGCCTCGATTGAGGAACTTGCGGTGGAATATCCTACTGGACATGACTCCTCAGGTAAGTTGCATGAGTCAGATTCATCTGGTTCTTCAGATGTTGAGAATGAAGTTGCACCACCTAATCTTGAACACATATTGGATGACCTCAATTCATTTGACATGGCTAATGGACTTGCTGCTTCGAAGAAAGTTACTATTAAGAAGTCCAAAGAGTCTCAAAAACACTATAAAAAGGCTCAGGAAAAAAGATCGTATGTGGAGGGCAGGGAATGA 1836 0.4401 MKWEVLGIEGCVSCHIKLGWSGKETDKRLIAMGKKEKTGLGRSLVKQHNHMIEETKEKGRIYKKKFLESFTEVTDIDTIIEQSENPEFQSDLPGPTTLASILSGSIGMTPEELRKQQRREEALHATSLRASSPFHYHICFIGLPQQLLCFIRPPWTSHMSLQKLDANERQSFLNWRRNLARLEENKTLVLTPFEKNIDIWRQLWRVVERSDLLVMVVDSRDPLFYRCPDLEAYAREVDEHKRTLLLVNKADLLPESIREKWAEYFRAHDILFIFWSAKAATAALEGKKLGSSWEADNLGRTDNPDTKIYGRDELLARLQSEAQEIVERRRNSGSSDTRHSKVKSPGENAAGSSSSSNVIVGFVGYPNVGKSSTINALVGQKRTGVTSTPGKTKHFQTLIISDKLTLCDCPGLVFPSFSSSRFEMIASGVLPIDRMTEHRESIQVVADRVPRHVIEATYKIKLPKPKPYESQSRPPLASELLRAYCASRGHVASSGLPDETRASRQILKDYIDGKLPHYAMPPAASIEELAVEYPTGHDSSGKLHESDSSGSSDVENEVAPPNLEHILDDLNSFDMANGLAASKKVTIKKSKESQKHYKKAQEKRSYVEGRE 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0353 611 MobiDBLite consensus disorder prediction 534 562 - -
Lal9g0353 611 MobiDBLite consensus disorder prediction 595 611 - -
Lal9g0353 611 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 198 490 IPR027417 -
Lal9g0353 611 PRINTS GTP1/OBG GTP-binding protein family signature 360 380 IPR006073 GO:0005525
Lal9g0353 611 PRINTS GTP1/OBG GTP-binding protein family signature 406 421 IPR006073 GO:0005525
Lal9g0353 611 Gene3D - 199 416 IPR027417 -
Lal9g0353 611 MobiDBLite consensus disorder prediction 325 343 - -
Lal9g0353 611 Gene3D - 420 521 IPR023179 -
Lal9g0353 611 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 200 415 IPR030378 GO:0005525
Lal9g0353 611 MobiDBLite consensus disorder prediction 585 611 - -
Lal9g0353 611 PANTHER GTPASE LSG1-1 32 600 - -
Lal9g0353 611 PANTHER LARGE SUBUNIT GTPASE 1 HOMOLOG-RELATED 32 600 IPR043358 GO:0003924
Lal9g0353 611 CDD HSR1_MMR1 199 415 - -
Lal9g0353 611 MobiDBLite consensus disorder prediction 325 354 - -
Lal9g0353 611 Pfam 50S ribosome-binding GTPase 360 420 IPR006073 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0353 Lal-Chr9 2354608 2357865 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0353 K14539 - gmx:100817523 829.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0353 9 2354608 2357865 Lal9g0353 9 2354608 2357865 ECH
Lal2g0387 2 2336048 2340481 Lal9g0353 9 2354608 2357865 LSH