LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal2g0387	ATGGGAAAGAACCAGAAGATAGGATTAGGGAGATCCCTTGTTAAGCAACACAATCATTTGGTTCAACAAACCAAAGAAAAGGGTCGTATCTACAATAAGAAGTTTCTAGAATCATTCACTGAAGTTACTGACATCGACGCTATCATTGAACAATCGGAAAATCCCGACGCCGATTCCGATGCCGACGTTCCTTATCTCCCCGCCGCCCCACCTACCATTCGCATCAATATGGATCCAAGGTCCGCGTCTAATGACATGACACCTGAAGAGTTGAAGAAGCAGCAGAAGAGGGAGGAGGCACTGCATGCTAGCAGTCTTCGAGTTCCACGGAGGCCACCGTGGACTGCAGACATGTCTGTGGATGAGCTTGATGCTAATGAAAGACAATCTTTCTTGACTTGGCGTCGCAGCCTAGCTAGGCTCGAGGAAAATAAGACGCTTGTGCTTACTCCATTTGAGAAAAATATTGATATATGGAGACAGCTCTGGCGGGTTGTGGAGCGCAGTGATTTGATTGTTATGGTCGTTGATTCACGTGATCCTTTGTTCTATCGCTGTCCTGATCTTGAGGCTTATGCACGAGAGGTTGATGTGCATAAACGCACATTGCTTTTGGTTAACAAGGCAGATCTTTTGCCTGCTTCTATCAGAGAGAAATGGGCAGAATATTTTCGTGCTCATGATGTTCTCTTCATTTTCTGGTCAGCTAAAGCTGCTACTGCAGTTTTGGAAGGCAAGAAGCTTGGTTCATCATGGGAGGCTGATAACATGGGGGGAACTAATAACCCAGACACAAAGATATATGGAAGGGATGAGCTTCTGGCTCGGTTGCAATCAGAGGCAGAAGAGATAGTTGAGAGGAGGAAAAATTCAGGCTCCTCTGACACAGGACCATCTAATGTTAAATCTCCTGGTGAAAATACTACTGGTAGTTCGTCGTCGGGTAATGTAATTGTGGGATTTGTTGGATATCCTAATGTGGGGAAAAGTTCAACTATCAATGCTCTGGTTGGTTCAAAAAGGACAGGTGTTACTTCTACTCCAGGGAAAACAAAGCATTTCCAGACATTAATTATTTCGGAAAAACTGACCCTTTGTGACTGCCCTGGATTAGTTTTTCCATCTTTCTCAAGCTCAAGATATGAGATGATTGCTTGTGGAGTGTTGCCTATTGATAGGATGACTGAACACAGGGAATCTGTCCAAGTTGTAGCTGATAGAGTCCCAAGACATGTCATTGAGGCAACTTATAAGATCAAACTTCCTAGACCTAAGTCATATGAGTCCCAATTCCGCCCCCCATTGGCATCTGAACTTATGAGATCGTATTGTGCTTCTCGCGGGTATGTTGCCTCTAGTGGACTTCCCGACGAAACTAGGGCTTCCCGCCAGATTCTGAAAGATTACATTGATGGGAAGCTGCCTCACTATGCAATGCCCCCTGGTGTGTCAAATGAGGAACTCGCTGTAGAAGATCCTGAAGGACATGACTCAGATAACTTGCAGGAGTCAGATTCATCTGGTATTGAAGATTCTTCAGATGTTGAGAAAGAAGTTGCACCAGCAAATCTTGAACACTTATTGGATGACCTCAATTCATTTGACATGGCTAATGCACTTGCCGCTTCAAAGAAAAGTAGTGTTAAGAAGTCCAAGGAATCTCTTAAACATCATAAAAAGCCTCAGAGGAAAAAAGATCGTACGTGGAGGGCAGGGAATGATGGTGGTGATGGAACCCCGATTGCAAGAGTCTTTCAGAAACCAGTAAACACAGGTCCTTCAAAGGTCTTATAA	1794	0.4431	MGKNQKIGLGRSLVKQHNHLVQQTKEKGRIYNKKFLESFTEVTDIDAIIEQSENPDADSDADVPYLPAAPPTIRINMDPRSASNDMTPEELKKQQKREEALHASSLRVPRRPPWTADMSVDELDANERQSFLTWRRSLARLEENKTLVLTPFEKNIDIWRQLWRVVERSDLIVMVVDSRDPLFYRCPDLEAYAREVDVHKRTLLLVNKADLLPASIREKWAEYFRAHDVLFIFWSAKAATAVLEGKKLGSSWEADNMGGTNNPDTKIYGRDELLARLQSEAEEIVERRKNSGSSDTGPSNVKSPGENTTGSSSSGNVIVGFVGYPNVGKSSTINALVGSKRTGVTSTPGKTKHFQTLIISEKLTLCDCPGLVFPSFSSSRYEMIACGVLPIDRMTEHRESVQVVADRVPRHVIEATYKIKLPRPKSYESQFRPPLASELMRSYCASRGYVASSGLPDETRASRQILKDYIDGKLPHYAMPPGVSNEELAVEDPEGHDSDNLQESDSSGIEDSSDVEKEVAPANLEHLLDDLNSFDMANALAASKKSSVKKSKESLKHHKKPQRKKDRTWRAGNDGGDGTPIARVFQKPVNTGPSKVL	597

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal2g0387	597	ProSiteProfiles	Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile.	159	374	IPR030378	GO:0005525
	Lal2g0387	597	MobiDBLite	consensus disorder prediction	85	104	-	-
	Lal2g0387	597	CDD	HSR1_MMR1	158	374	-	-
	Lal2g0387	597	MobiDBLite	consensus disorder prediction	489	503	-	-
	Lal2g0387	597	PANTHER	LARGE SUBUNIT GTPASE 1 HOMOLOG-RELATED	1	564	IPR043358	GO:0003924
	Lal2g0387	597	PANTHER	GTPASE LSG1-1	1	564	-	-
	Lal2g0387	597	MobiDBLite	consensus disorder prediction	541	597	-	-
	Lal2g0387	597	MobiDBLite	consensus disorder prediction	291	312	-	-
	Lal2g0387	597	Pfam	50S ribosome-binding GTPase	319	375	IPR006073	GO:0005525
	Lal2g0387	597	Gene3D	-	377	480	IPR023179	-
	Lal2g0387	597	PRINTS	GTP1/OBG GTP-binding protein family signature	319	339	IPR006073	GO:0005525
	Lal2g0387	597	PRINTS	GTP1/OBG GTP-binding protein family signature	365	380	IPR006073	GO:0005525
	Lal2g0387	597	MobiDBLite	consensus disorder prediction	70	104	-	-
	Lal2g0387	597	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	157	427	IPR027417	-
	Lal2g0387	597	MobiDBLite	consensus disorder prediction	550	566	-	-
	Lal2g0387	597	MobiDBLite	consensus disorder prediction	284	312	-	-
	Lal2g0387	597	Gene3D	-	158	375	IPR027417	-
	Lal2g0387	597	MobiDBLite	consensus disorder prediction	488	517	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal2g0387	Lal-Chr2	2336048	2340481	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal2g0387	K14539		-	gmx:100817523	916.376

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lal2g0387	2	2336048	2340481	Lal2g0387	2	2336048	2340481	ECH
	Lal2g0387	2	2336048	2340481	Lal9g0353	9	2354608	2357865	LSH