Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0306 CTCCAATTTAAGCTTAAGTTTCAAAGACAAACACTGCAACATAATCATTTTGTAACACAGTCTCTACTTTCTGTGTGTTTTGATTTGAAGAGTATGGTGTATTCAAGTTCTTTGTTGACTTGCTTTCTTCTTCTGGCTGTGGTGAATGGAAAGCCTATAGTTCCTGCATTGTTCATATTTGGTGACTCTATTGGTGACGCTGGCAATAATAACCAATTACTTACTTTGGTTAAATCAAATTTCCCTCCTTATGGAAGAGACTTCAAGAATCACATCCCTACAGGAAGGTTCTGCAATGGAAAGCTTGCCACAGACTTCATTGCTGAAAAACTTGGATTTACTTCTCCCCAACCAGCTTACTTCAACTTAGAGGCCAAAGGAAATAACCTCTTGAATGGTGCTAACTTTGCTTCAGCTGCTTCGGGTTTTTATGATCTTGTACCCATGCTATATAATACAATTCCATTATATAAGCAGATGGAGTACTATGAAGAATGCCAGAGTATATTGGTGGAAATAGTAGGACAATCCAAAGCTTCATCAATTATATCAAATGCAATATATTTGATTATCGATGGCAGTAGCGACTTTATTAACTATTACACAAACATTTTGGTTCACAATGGTCATACATTTGAACAATTCTCAGACATTGTACTGCAAAGCTATTCCAAATACATTCAGCATATATATGCATTGGGAGCAAGGAGGATAGGTGTGACAAACTTAGCTCCAACGGGTTGCCTGCCGATAGTCATTACTCTCTTCGGCTCTCATAGGAATGAATGTGTGGATTGGCTAAACAAAGATGCTATTTATTACAATAAAAGGTTGAATTATACATCTGAGAAGTTGCAAAAATTGCTTCCCGACCTGAATTTGGTTGTCTTTGACATCTACCAACCTCTGTATAATCTTATAACTAAGCCTTCTGAAAATGGTACAAAATCTAATTATCCTAGTGTGCCGATCTTATTATTCCTTATGAACCTAGGATTCGTCATTGTTTATTTGTTTCTTATATGTGGCATGCACTCCACTGCCATCACAGGATTTCTTGAAACAAGGAGGGGTTGTTGTGGAACGGGTTTGATCGAGTTATCTATTTTGTGCAATGAGAAGTCAATCGGAACATGTGTTAATGCATCTGAATATGTATTTTGGGATACTGTTCATCCCACAGAAGCTGCAAACCAGATTTTGGCAGATCAAATGATTGCTGCTGGCATCTCTCAACTTACATCTTAA 1248 0.3734 LQFKLKFQRQTLQHNHFVTQSLLSVCFDLKSMVYSSSLLTCFLLLAVVNGKPIVPALFIFGDSIGDAGNNNQLLTLVKSNFPPYGRDFKNHIPTGRFCNGKLATDFIAEKLGFTSPQPAYFNLEAKGNNLLNGANFASAASGFYDLVPMLYNTIPLYKQMEYYEECQSILVEIVGQSKASSIISNAIYLIIDGSSDFINYYTNILVHNGHTFEQFSDIVLQSYSKYIQHIYALGARRIGVTNLAPTGCLPIVITLFGSHRNECVDWLNKDAIYYNKRLNYTSEKLQKLLPDLNLVVFDIYQPLYNLITKPSENGTKSNYPSVPILLFLMNLGFVIVYLFLICGMHSTAITGFLETRRGCCGTGLIELSILCNEKSIGTCVNASEYVFWDTVHPTEAANQILADQMIAAGISQLTS 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0306 415 CDD SGNH_plant_lipase_like 55 406 IPR035669 -
Lal9g0306 415 Pfam GDSL-like Lipase/Acylhydrolase 57 404 IPR001087 GO:0016788
Lal9g0306 415 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 57 68 IPR008265 GO:0006629|GO:0016298
Lal9g0306 415 PANTHER GDSL ESTERASE/LIPASE EXL3 345 411 - -
Lal9g0306 415 PANTHER GDSL ESTERASE/LIPASE EXL3 37 315 - -
Lal9g0306 415 Gene3D SGNH hydrolase 46 411 IPR036514 -
Lal9g0306 415 PANTHER GDSL-MOTIF LIPASE 37 315 - -
Lal9g0306 415 PANTHER GDSL-MOTIF LIPASE 345 411 - -
Lal9g0306 415 SUPERFAMILY SGNH hydrolase 57 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0306 Lal-Chr9 1975250 1976799 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0306 52 405 Acyl Lipid Metabolism Gene Families AT4G10950 29.412 6.90e-52 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0306 - - gmx:100775618 473.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0410 1 2532889 2537468 Lal9g0306 9 1975250 1976799 LSH
Lal8g0170 8 1147517 1149984 Lal9g0306 9 1975250 1976799 PCT
Lal9g0306 9 1975250 1976799 Lal8g0170 8 1147517 1149984 PCT