Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0410 ATGGGCTGTGGGCTGTGCTCCTCTCCTGTGAGGGAGGTATTGGACCCAGATCCTGGAGAGGAGTTATATTCATTAATTATATGGTATGTCCAAATGCAAGTGTTGTTTAAGACTCTTACGTCCCAGTTCTGGTCTGGAACGCCAACCTGGAGCTGGCTAGAAAGACATATGGGGTATTCAAGTTCTTTATTGATAACTTGTTTTCTTCTTCTGGTTGTGGTCCTCAATGTGGCTAATGGAAAACCTTTAGTCCCTGCATTGTTCATATTTGGGGACTCTGTTGTTGACTCTGGAAATAATAACAACTTACTTACTTTTGTTAAAGCAAACTTCCCTCCTTATGGAAGAGACTTCAAAAATCATACCCCAACGGGAAGGTTTTGTAATGGAAAACTTGCCATTGATTTCATAGCTGAAACTCTTGGATTTACCTCTTACCAGCCAGCTTACCTCAACTTAGAGGTCAAAGGAAAGAACCTCTTGAATGGTGCCAACTTTGCCTCGGCTGCTTCTGGCTTCTTTGATTTTATACCTCGGATGCATAATACTATTCCATTCTACCGACAGCTGGAATACTACCAAGAGTGTCAAAACAAATTGGTGGAAATAGTAGGTCCATCAAAGGCTTCATCAATTATATCAGATGCTATATACATTGTTAATGATGGAAGCAGTGACTTTGTTAACTATTACATGAATCCTCTACTTCACAATATTTATACGAGATTATATGCAATGGGAGCAAGGAGAATTGGTGTCACAAGTGTAGCTCCAATGGGTTGCTTGCCAATATTGATTACTGTCTTTGGTTCTCATAACAATGAATGTGTGGATAGGCTAAACAATGATTCTATTTACTACAATGAAAAATTAAATAAGACATCTGAAAACTTGCGAAAAACTCTTCCTGACATTAAATTGGTTGTATTTGACATCTACCAACCTCTCTATAACCTTGTAGATAGTCCTTCTGATAATGGATTTTCTGAAGTAAGGAGGGGCTGTTGTGGAACAGGTTTGCTAGAGACAGCTATAACGTGTAATAACATGTCCATAGGTACATGTGCTAATGCATCTAAGTATGTATTTTGGGACAGTGTTCATCCCTCAGAGGCTACAAACAAGATTTTGGCTGATTCTATAGTTGTTGCTGGCATTCCGTTGATCATGTCTTAA 1176 0.3903 MGCGLCSSPVREVLDPDPGEELYSLIIWYVQMQVLFKTLTSQFWSGTPTWSWLERHMGYSSSLLITCFLLLVVVLNVANGKPLVPALFIFGDSVVDSGNNNNLLTFVKANFPPYGRDFKNHTPTGRFCNGKLAIDFIAETLGFTSYQPAYLNLEVKGKNLLNGANFASAASGFFDFIPRMHNTIPFYRQLEYYQECQNKLVEIVGPSKASSIISDAIYIVNDGSSDFVNYYMNPLLHNIYTRLYAMGARRIGVTSVAPMGCLPILITVFGSHNNECVDRLNNDSIYYNEKLNKTSENLRKTLPDIKLVVFDIYQPLYNLVDSPSDNGFSEVRRGCCGTGLLETAITCNNMSIGTCANASKYVFWDSVHPSEATNKILADSIVVAGIPLIMS 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0410 391 PANTHER GDSL-MOTIF LIPASE 66 389 - -
Lal1g0410 391 Gene3D SGNH hydrolase 76 384 IPR036514 -
Lal1g0410 391 SUPERFAMILY SGNH hydrolase 87 382 - -
Lal1g0410 391 Pfam GDSL-like Lipase/Acylhydrolase 87 380 IPR001087 GO:0016788
Lal1g0410 391 PANTHER GDSL ESTERASE/LIPASE EXL3 66 389 - -
Lal1g0410 391 CDD SGNH_plant_lipase_like 85 381 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0410 Lal-Chr1 2532889 2537468 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0410 82 381 Acyl Lipid Metabolism Gene Families AT4G10950 31.250 1.92e-59 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0410 - - gmx:100775618 451.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0410 1 2532889 2537468 Lal1g0410 1 2532889 2537468 ECH
Lal1g0410 1 2532889 2537468 Lal9g0306 9 1975250 1976799 LSH
Lal8g0170 8 1147517 1149984 Lal1g0410 1 2532889 2537468 PCT
Lal1g0410 1 2532889 2537468 Lal8g0170 8 1147517 1149984 PCT