Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0244 ATGGAGTTCCTAACTCTAGTTTATGTAGTTTCAGCACTGTACTTGTGTTCCCTGGTCTGGAAGTTTTATGTTCAGAGGAGGGACCAAGAGTGTTACATATTAGACTACCAATGTTACAAGCCAACTAATGACAGAATGCTTGAAACTGAGTTTTGTGGTAAGATCATCAAAAGAAACGAAAACTTGGGTCTCAATGAGTACAAGTTTCTCCTCAAAGCTATTGTTAGTTCCGGCATAGGGGAGGAAACTTATGCTCCAAGAAACATCTTTGACGGCCGTGAAACAAACCCAACTTTGATGGATAGCATAACAGAAATGGAGGAGTTCTTCAATGACACCATTGCTAAACTTCTTGCCAGGTCAGAAATTTCACCTTCTGAGATCGATGTCCTTGTGGTTAATATCTCTATGCTTGCTGCTGTTCCTTCCTTATCTTCAAGAATCATTAACCTTTACAAACTGAGGCATGATGTTAAGGTTTACAACCTCACTGGGATGGGTTGTAGTGCTAGCTTAATTTCTTTGGACATTATTAAGAACATTTTTATGTCACAAAGGAACAAGTATGCTCTTTTGGTCACTTCTGAGTCCTTAAGTCCAAATTGGTACACTGGCAATGATAGATCAATGATCCTTGCCAATTGTTTGTTCCGCTCCGGTGGTTGTGTCATTCTTCTCACAAACAAAAGATCCTTAAAACATAGAGCCATGTTTAGATTGAAGTGTTTGGTGAGGACACATCATGGTGCTAGAGATGAGGCCTATAGTTGTTGTGTTCAAAAAGAAGATGACCAAGGTAGGCTTGGTTTTCATCTTGGGAAAACTCTCCCTAAGGCAGCTACAAGAGCCTTTATTGATAACTTAAGGGTATTATCTCCCAAGATTTTACCAGCTAGAGAGTTGCTTAGGTTTCTTATCATGTCTCTAATTAAAAATGTAATGAAAAGTAACAACCCTAAGTCTTCAAGTGGTGGAGGTAGTAGTAATACTACAAATACTAAATCCCCTTTGAACTTCAAGACTGGGGTTGATCATTTTTGCCTCCATACAGGAGGAAAGGCAGTGATTGATGGAATTGGAATGAGCCTAGATCTGTGTGAATATGATCTTGAACCAGCTAGAATGACACTACACCGTTTTGGTAATACATCTGCAAGTAGCCTATGGTATGTTCTAGGGTACATGGAGGCCAAGAAGAGGCTAAAAAAGGGTGATAAAGTATGGATGATAAGTTTTGGTGCTGGCTTTAAATGCAACAGCTGTATGTGGGAGGTAATGAAGGATCTTGAGGATCCTAATGTGTGGGGTGATTGCATTGATGACTATCCACCACAGTGTTTGACCAATCCCTTCATGGACAAGTATAGTTGGATAAATCAAGTTGAGGATCCAAACTCAGTTGAACTTCCAGATTTTCTTAAGTAA 1425 0.3958 MEFLTLVYVVSALYLCSLVWKFYVQRRDQECYILDYQCYKPTNDRMLETEFCGKIIKRNENLGLNEYKFLLKAIVSSGIGEETYAPRNIFDGRETNPTLMDSITEMEEFFNDTIAKLLARSEISPSEIDVLVVNISMLAAVPSLSSRIINLYKLRHDVKVYNLTGMGCSASLISLDIIKNIFMSQRNKYALLVTSESLSPNWYTGNDRSMILANCLFRSGGCVILLTNKRSLKHRAMFRLKCLVRTHHGARDEAYSCCVQKEDDQGRLGFHLGKTLPKAATRAFIDNLRVLSPKILPARELLRFLIMSLIKNVMKSNNPKSSSGGGSSNTTNTKSPLNFKTGVDHFCLHTGGKAVIDGIGMSLDLCEYDLEPARMTLHRFGNTSASSLWYVLGYMEAKKRLKKGDKVWMISFGAGFKCNSCMWEVMKDLEDPNVWGDCIDDYPPQCLTNPFMDKYSWINQVEDPNSVELPDFLK 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0244 474 Pfam FAE1/Type III polyketide synthase-like protein 23 311 IPR013601 GO:0006633|GO:0016020|GO:0016747
Lal9g0244 474 SUPERFAMILY Thiolase-like 18 232 IPR016039 GO:0016746
Lal9g0244 474 PANTHER 3-KETOACYL-COA SYNTHASE 1 464 IPR012392 GO:0006633|GO:0016020|GO:0016747
Lal9g0244 474 Gene3D - 62 425 IPR016039 GO:0016746
Lal9g0244 474 SUPERFAMILY Thiolase-like 243 426 IPR016039 GO:0016746
Lal9g0244 474 CDD CHS_like 12 423 - -
Lal9g0244 474 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 343 424 IPR013747 -
Lal9g0244 474 PANTHER 3-KETOACYL-COA SYNTHASE 1 464 - -
Lal9g0244 474 PIRSF Very_long_ch_3-ktacl-CoA_syn 1 457 IPR012392 GO:0006633|GO:0016020|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0244 Lal-Chr9 1505158 1506582 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0244 19 471 Acyl Lipid Metabolism Gene Families AT2G28630 68.478 0.0 673
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0244 K15397 - gmx:100810048 761.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0244 9 1505158 1506582 Lal9g0244 9 1505158 1506582 ECH
Lal10g1255 10 18778374 18780350 Lal9g0244 9 1505158 1506582 PCT
Lal9g0244 9 1505158 1506582 Lal10g1255 10 18778374 18780350 PCT