Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0214 ATGTCAGGTGGTTTCTTTCGAGGTACTTCTGCGGATCAAGACACTCGGTTTTCGAATAAACAAGCGAAGCTGATGAAGTCTCAGAAGTTTCCACCTGAACTAGAGCATCTGGTGGATATGACCAAGGTGAACATGGAAGTAATGAAGCCTTGGATTACTAGAAGGGTGACAGAGTTTCTTGGCTTTGAAGATGAGGTGCTTATTAACTTCATACATGGTCTTCTGGATAAGAAGGAAGTGAATGGGAAGGAAGTTCAAATTCAAATTACTGGGTTTATGGAGAAAAACACTGGAAAGTTCATGAAAGAACTTTGGACACTTCTTCTTAGTGCGCAGAAAAATGCCAGCGGCGTTCCTCAGCAGTTCTTGGACGCCAAAGAAGAAGAATTACAGAAGAAGAAGATTGAAAATGATCGGATAACAAGTGAAATTCAGAGGAAAAAAGACATAGAAGTCAGAGAAAGAATGGAAGAAAGGTTGAAAAAGCTGGACGATGGATCCAATGTGAAGAATAATGATACTAATTCAGACTCAACCTTGAAGCCTAAGGATTCAGGGCACTATGTTCATGACGGCAAAGAATCTGACAAGAGGAATGGTGTTAGATCAAGGAGCAGTGGTACGCACAGGTCAAGGAGTATATCCAGGTCACCAGAAGCTCGAGGGCGCTCTGTTTCTTCTGAAAGAATTCATCGTTCTCCACGACAGCAGTTTATTTCTCCTCGTAGGCGTTCACCATGGCGATCTCCTCACAGGAGGCCTTATTCATGGCGAAGATCGAGATCCCGCTCAAATTACAGATCTCCTTCTCCTATACGACGTAGAATGTATTCTCCATATCGCCACAGTTCACCTTTTCGTCAACACAGAACACCATCTCCCATTAAAAGACGCAGGTCACCTCCAGCACGTCGACACAGATCACCTTCTCCACTGCATCGTCGTCGATCACCACCACCTATAAGACGGCAAAGGTCACCCTCAACCATGCGACGAAGATCGCCTGTCATGCGGGGTAGTTCGCCTTCACCTGTGCGCCGACCACCAACACGTGTACAGCACAGATCAGACTCTCCCATGCAATCCTTCTCTCCCATACGACGAAGGTATGTGAGTAGATCTCCGCATCGCAGGTCTCCATCTCCTTTGCGACGTAGATCATCTGTTTCTGGTAAGAAAAGACCACCAAGTCCCTCCCCAAGGAGGTCTCTTTCTCCTGATGAATGGAGTTCCAAGTCCCCTGTACGGCATGTATCTCCATCTCCACTTAGGAAAATTTCTCCAAGACACCAGAGAAATTCTCCTGTCAGAATGCAAGAAAGATTGTCACCTAAGATTCAACAACCCTCTAGACCTTTGCAGTCTGGACAGAGAGATAAGGATCACAAAGCTTCAAACCTTAGGTTACAAGATTCAATGTCTACACCTGAAAAGTCTCCAATTCGGTCAGTATCTCCACAAGCAAGAACTAGAACCAGTAATGAAGATAGAAGTCCACGTAAGAGCCCAAAGCAAAGAAGAGAAAGGTTGACTCGTGAAAGAGGCTCAAGTCTGCCAAAGAAACCAAGAACCCAGAAACCTAGTCATGACAGTCCAGAGAAGAGTGAAGGAGCAGAAGAAACATATTATTCTAGGTTTGAGCAAAAATTTGATAACCCATTACTTGGTTTTACTTATTTGTTGAACATTAAGTTACTAGATTTCCTGGAAACAGCTTCCTCGCTTGTGACTTGTGAGAGTAAGGCTGTGTACATCTACCCTCTCCAGACCCCACTAGATGGGAACCTCATATACTGGGCCACCATAGAAAACAGAGATCTTAAAACAACATCATCACTAAAGAAATCAAAATATTCATCCCCAATCAGAAAGCTAAAAGATTCACCAGCAAAGATTTGTAATGTGAATGAGTTCTCTCCTGAAAGGGCAGCTGGTCATTTGGCATCTCAATATCGTCATTATGATGACACTGATTGGAGAAAGAAAAGTCGGGAGATAAAAGGTGATAGAACTTCAGGGAAGGGGGATGAATCTCCTGCTCAACAGAAGTCACCAATGAACAAAGAAATTCTTTCCAGCAAGAAGCCTCGTGAATCCCGTACTCTGGATATTAAAAAATTTGATGACAAGGATCACTCACATTCAAACTATGTCAAAAATAGTGATTGGGGCCACAAATCAGAAGTTACTCAAGATTTAGTTGAAAAAGTTGATCGTCTCAATCATGATGCATCCTATGATTCTGTTTCTAAGGAAAGTGATAAGCATAAAAAGGATAGGAGAAAACATAAAAGGTCTGAGAGAAAAATTGTGTCTTCAGATGAAGATTATAGTTCTAATTCTGAGTTAGAGGACAGGAAAGAGGCTAAGAGGAAGAAAAAGGAGAAGCAGCAGCAGCGGAAAGAGGAGAAGCGCGAGGAAAAGCGTCTAAGACGTGAAGAGAGGCGACGCAGAAGGGAAGATCGTCGTGCAGAGAAGTTGAAAGTGAAGAGTAAATTAGACTATATTTCTGAAGACGAGGAAGCTGAACGAATGGATCGAAGTGATAATGAAGAGACACTGTCTGAGCAAAAGAAGCTTGAGATTGAGTTGCGGAAGAAGGCTCTCGAGTCCCTCAAAGCAAAGAGGGGCATCGATAACTAA 2643 0.4321 MSGGFFRGTSADQDTRFSNKQAKLMKSQKFPPELEHLVDMTKVNMEVMKPWITRRVTEFLGFEDEVLINFIHGLLDKKEVNGKEVQIQITGFMEKNTGKFMKELWTLLLSAQKNASGVPQQFLDAKEEELQKKKIENDRITSEIQRKKDIEVRERMEERLKKLDDGSNVKNNDTNSDSTLKPKDSGHYVHDGKESDKRNGVRSRSSGTHRSRSISRSPEARGRSVSSERIHRSPRQQFISPRRRSPWRSPHRRPYSWRRSRSRSNYRSPSPIRRRMYSPYRHSSPFRQHRTPSPIKRRRSPPARRHRSPSPLHRRRSPPPIRRQRSPSTMRRRSPVMRGSSPSPVRRPPTRVQHRSDSPMQSFSPIRRRYVSRSPHRRSPSPLRRRSSVSGKKRPPSPSPRRSLSPDEWSSKSPVRHVSPSPLRKISPRHQRNSPVRMQERLSPKIQQPSRPLQSGQRDKDHKASNLRLQDSMSTPEKSPIRSVSPQARTRTSNEDRSPRKSPKQRRERLTRERGSSLPKKPRTQKPSHDSPEKSEGAEETYYSRFEQKFDNPLLGFTYLLNIKLLDFLETASSLVTCESKAVYIYPLQTPLDGNLIYWATIENRDLKTTSSLKKSKYSSPIRKLKDSPAKICNVNEFSPERAAGHLASQYRHYDDTDWRKKSREIKGDRTSGKGDESPAQQKSPMNKEILSSKKPRESRTLDIKKFDDKDHSHSNYVKNSDWGHKSEVTQDLVEKVDRLNHDASYDSVSKESDKHKKDRRKHKRSERKIVSSDEDYSSNSELEDRKEAKRKKKEKQQQRKEEKREEKRLRREERRRRREDRRAEKLKVKSKLDYISEDEEAERMDRSDNEETLSEQKKLEIELRKKALESLKAKRGIDN 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0214 880 MobiDBLite consensus disorder prediction 370 391 - -
Lal9g0214 880 MobiDBLite consensus disorder prediction 354 368 - -
Lal9g0214 880 ProSiteProfiles PWI domain profile. 27 125 IPR002483 GO:0006397
Lal9g0214 880 MobiDBLite consensus disorder prediction 403 417 - -
Lal9g0214 880 Coils Coil 779 830 - -
Lal9g0214 880 Gene3D PWI domain 33 125 - -
Lal9g0214 880 MobiDBLite consensus disorder prediction 214 230 - -
Lal9g0214 880 MobiDBLite consensus disorder prediction 161 540 - -
Lal9g0214 880 PANTHER SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEIN 1 877 - -
Lal9g0214 880 Coils Coil 123 143 - -
Lal9g0214 880 MobiDBLite consensus disorder prediction 291 329 - -
Lal9g0214 880 MobiDBLite consensus disorder prediction 659 676 - -
Lal9g0214 880 MobiDBLite consensus disorder prediction 245 260 - -
Lal9g0214 880 SUPERFAMILY PWI domain 25 133 IPR036483 GO:0006397
Lal9g0214 880 MobiDBLite consensus disorder prediction 690 755 - -
Lal9g0214 880 MobiDBLite consensus disorder prediction 768 855 - -
Lal9g0214 880 MobiDBLite consensus disorder prediction 659 855 - -
Lal9g0214 880 PANTHER SERINE/ARGININE REPETITIVE MATRIX PROTEIN 1 1 877 - -
Lal9g0214 880 SMART pwi_2 40 114 IPR002483 GO:0006397
Lal9g0214 880 MobiDBLite consensus disorder prediction 493 540 - -
Lal9g0214 880 MobiDBLite consensus disorder prediction 437 454 - -
Lal9g0214 880 Pfam PWI domain 46 115 IPR002483 GO:0006397
Lal9g0214 880 MobiDBLite consensus disorder prediction 183 203 - -
Lal9g0214 880 MobiDBLite consensus disorder prediction 468 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0214 Lal-Chr9 1309595 1319537 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0214 K13171 - gmx:100810238 623.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0214 9 1309595 1319537 Lal9g0214 9 1309595 1319537 ECH
Lal1g0309 1 1865482 1875839 Lal9g0214 9 1309595 1319537 LSH