Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0309 ATGTCGGGAGGTTTCTTTCGCGGTACTTCTGCTGATCAAGACACTCGGTTTTCGAACAAGCAAGCGAAGTTGCTGAAATCGCAGAAGTTTCCGCCTGAATTGGAGCATCTGGTGGACATGAACAAGGTGAATATGGAAGTAATGAAGCCTTGGATTGCCAAAAGGGTGACGGAGCTTCTTGGCTTTGAAGATGAAGTCCTTATTAACTTCATACATGGTCTTCTGGATAAGAAGGAAGCGAATGGAAAGGAGGTTCAAATTCAAATTACTGGGTTTATGGAGAAAAACACTGGAAAGTTCATGAAAGAGCTCTGGACACTTCTGCTTAGTGCGCAGAAAAATGCCAGTGGCATTCCTCAGCAGTTCTTGGACGCCAAAGAAGAAGAATTACGGAAGAAGAAGGCTGAAAATGATAGGATAACAAGTGAAATTCAAAAGAAAAAAGATATTGAAGGCAGAGAAATCATGGAGGAGAGGTTGACAAGACTGGCCGCTGGATTGGATATGAAGATTAATGATACTGCTTCAGACTCAACCGTGAAGCCCAGGGATTCAGGGCAATATATTCATGATGGGAAAGATTCTGACAAGAGGAATGGTGTTAGAGCAAGGAACAGGGTTTCTAGGTCCCCACACTCACCTGCAGTTTCCACTTCTCCTCACCGAGTCTCACCTTCAACGTCAATGAGTAAATCATTTTCTAATTCCCGAAGCTATTCAGGTGGTAGACACAGGTCAAGGAGTATATCCAGGTCACCAAATGCTCAAGGGCGCTCTGTTTCTTCTGAAAAGATTCGTCATTCTCCAAGACGACAATCTATTTCTCCTCGGAGGCGTTCGCCATGGAGATCTTACAGGGGGGGTTATTTACGGCGAAGTTCCAGATCCCGCTCAAATTACAGATCTCCTTCTCCTATTCAACGTAGAATGCATTCTCCATATTTTCGCGATTCACCTTTTCATCGCCGCAGAACACCCTCTCCTATTAAAAGACACAGATCACCTTCTCCAGCACGTCGACACAGATCACCTCCTCCAGCACGTCGACACGGATCACCTCCTCCAGCACGTCGACACAGATCACCTCCTCCAGCACGTCGACACAGATCACCTCCTCCAGCACGTCGACACAGATCACCTCCTCCAGCACATCGGCACAGATCACCTCCTCCAGCACGTCGGCACAGATCACCTCCTCCAGCACGTCGACACAGATCACCTTCTCCATTGCATCGCCCTCGATCACCCCCACCAATGAGACGGCGAAGGTCACCCTCACCTGTTCACGGAAGATCTCCTGTCATGCAGGGTAGGTCGCCTTCACCTGTGCGCCGACCACCAACACGTGTATGGCGCAGATCAGACTCTCCCATGCAATCCCCCTCTCCCATACGACGAAGGTATGGCAGTAGATCTCCACGACGCAGGTCTCCATCTCCTTTGCGGCGTAGATTACCTGTTTCTGGTAAGAAAAGATCACCAAGTCCCTCCCCACGGAGGTCCCTTTCTCCTGATGAATGGAGTTCTCAGTCCCCCACACGGCATGTATCTCCATCTCCACTTAGGAGAAACTATCCGAGACGCCAGAGGAATTCTCCTTTCAGAGTGCAAGAGAAATTGTCACCTGAGATTCATCAACACTCTAGACCTTTGCAGCCTGGACAAAGAGATAAGGATAGCAAAGCTTCACTCCTTAACTCTGAAGATTCAATGTCTACACCTGAGAAGCTTCCAGTTCGACCAGTATCTCCACAAGCAAGGAGTAGGACCAGTAGTGAAGATAGGAGCCTGCCTAAGAGCCCGAGGCAAAGAAGAGAGAGGTTGACCGATGAAAGAGGCTCGAGCCCTCCAAAGAAACCAAGATCCCAGAAACCTAGCCATGACAGCCCAGAGAAGAGTAAGGGAGCAGAAGAAACATATTATTATAGAGAGAGCAGGCATCTTAAAACAACATCACCACAAAGGAACTCAAAATATGCATCCTCGGTCAGTAAGCAAAAGGATTCACCAGCGAAGTTTCATGATGAGGATGAGTTCTCTCCTGAAAGGGCAACTGGTCACCTGGCACCGAAATATCGTCATTATGATAGCATTGATCAGAGAAAGAAAACCAGGGAGATAAAACGTGATAGAACTCCAGGGGAGGGGGCTGAATCTCCTGCTCAACAGAAGTCACCAATGAACACAGAGATTCTTTCTAGCAAGAAGCCTCGTCAGACCTATGCTGCAGATATTAAAAAACCCGATGACAAGGATCACTCACTTTCAAACTATGCCAAAAATAGTGACCGGGGCCACAAATCAGAAGCCACTCAAGGTTTAGTTAGAAAAGTTGATCATGTCAATCATGATGCTTCATATGATTCTGTTTCTGAGGAAAGTGATAAGAATAGAAAGGATAGGAGAAAGCATAAAAGGTCTGAGAAAAAATTTGTGTCTTCAGATGAAGATTATAGTTCTGATTCTGAGTTAGAGGACAGGAAAGAGGCTAAGAGGAAGAAAAGGGAGGGGAAGAAGCGGCGGAAGGAGGAAAAGCGTCAAAGACGAGAAGAGAGACGACACAGGAGGGAAGAACGGCGTGCAGAGAAGCTGAGAGTGAAGGGTAGACCAGATTATATTTCTGAAGACGAGGAGGCTGAAAGATTGGATCGAAATGATAATGAAGAGACACTGTCTGAGCAAAAGAAACTTGAGATTGAGTTGCGGAATAAGGCTCTTGAATCCCTCAAAGCAAAGAGGGGCATGGATAACTAA 2754 0.468 MSGGFFRGTSADQDTRFSNKQAKLLKSQKFPPELEHLVDMNKVNMEVMKPWIAKRVTELLGFEDEVLINFIHGLLDKKEANGKEVQIQITGFMEKNTGKFMKELWTLLLSAQKNASGIPQQFLDAKEEELRKKKAENDRITSEIQKKKDIEGREIMEERLTRLAAGLDMKINDTASDSTVKPRDSGQYIHDGKDSDKRNGVRARNRVSRSPHSPAVSTSPHRVSPSTSMSKSFSNSRSYSGGRHRSRSISRSPNAQGRSVSSEKIRHSPRRQSISPRRRSPWRSYRGGYLRRSSRSRSNYRSPSPIQRRMHSPYFRDSPFHRRRTPSPIKRHRSPSPARRHRSPPPARRHGSPPPARRHRSPPPARRHRSPPPARRHRSPPPAHRHRSPPPARRHRSPPPARRHRSPSPLHRPRSPPPMRRRRSPSPVHGRSPVMQGRSPSPVRRPPTRVWRRSDSPMQSPSPIRRRYGSRSPRRRSPSPLRRRLPVSGKKRSPSPSPRRSLSPDEWSSQSPTRHVSPSPLRRNYPRRQRNSPFRVQEKLSPEIHQHSRPLQPGQRDKDSKASLLNSEDSMSTPEKLPVRPVSPQARSRTSSEDRSLPKSPRQRRERLTDERGSSPPKKPRSQKPSHDSPEKSKGAEETYYYRESRHLKTTSPQRNSKYASSVSKQKDSPAKFHDEDEFSPERATGHLAPKYRHYDSIDQRKKTREIKRDRTPGEGAESPAQQKSPMNTEILSSKKPRQTYAADIKKPDDKDHSLSNYAKNSDRGHKSEATQGLVRKVDHVNHDASYDSVSEESDKNRKDRRKHKRSEKKFVSSDEDYSSDSELEDRKEAKRKKREGKKRRKEEKRQRREERRHRREERRAEKLRVKGRPDYISEDEEAERLDRNDNEETLSEQKKLEIELRNKALESLKAKRGMDN 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0309 917 MobiDBLite consensus disorder prediction 325 427 - -
Lal1g0309 917 PANTHER SERINE/ARGININE REPETITIVE MATRIX PROTEIN 1 385 913 - -
Lal1g0309 917 PANTHER SERINE/ARGININE REPETITIVE MATRIX PROTEIN 1 1 416 - -
Lal1g0309 917 ProSiteProfiles PWI domain profile. 27 125 IPR002483 GO:0006397
Lal1g0309 917 Coils Coil 123 150 - -
Lal1g0309 917 MobiDBLite consensus disorder prediction 809 832 - -
Lal1g0309 917 MobiDBLite consensus disorder prediction 184 203 - -
Lal1g0309 917 MobiDBLite consensus disorder prediction 468 489 - -
Lal1g0309 917 Pfam PWI domain 46 115 IPR002483 GO:0006397
Lal1g0309 917 SUPERFAMILY PWI domain 25 133 IPR036483 GO:0006397
Lal1g0309 917 SMART pwi_2 40 114 IPR002483 GO:0006397
Lal1g0309 917 MobiDBLite consensus disorder prediction 668 715 - -
Lal1g0309 917 MobiDBLite consensus disorder prediction 592 651 - -
Lal1g0309 917 MobiDBLite consensus disorder prediction 174 895 - -
Lal1g0309 917 Gene3D PWI domain 33 125 - -
Lal1g0309 917 MobiDBLite consensus disorder prediction 291 306 - -
Lal1g0309 917 MobiDBLite consensus disorder prediction 718 736 - -
Lal1g0309 917 Coils Coil 887 907 - -
Lal1g0309 917 MobiDBLite consensus disorder prediction 494 518 - -
Lal1g0309 917 MobiDBLite consensus disorder prediction 850 895 - -
Lal1g0309 917 MobiDBLite consensus disorder prediction 740 799 - -
Lal1g0309 917 Coils Coil 827 867 - -
Lal1g0309 917 PANTHER SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEIN 385 913 - -
Lal1g0309 917 PANTHER SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEIN 1 416 - -
Lal1g0309 917 MobiDBLite consensus disorder prediction 210 262 - -
Lal1g0309 917 MobiDBLite consensus disorder prediction 540 564 - -
Lal1g0309 917 MobiDBLite consensus disorder prediction 652 667 - -
Lal1g0309 917 MobiDBLite consensus disorder prediction 833 849 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0309 Lal-Chr1 1865482 1875839 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0309 K13171 - gmx:100810238 437.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0309 1 1865482 1875839 Lal1g0309 1 1865482 1875839 ECH
Lal1g0309 1 1865482 1875839 Lal9g0214 9 1309595 1319537 LSH