Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0195 ATGGGTAGAAGTGATAGTGCTGTTTATGCAATGTTACTACTACTCATCATCACTCTAGTAGCCTCACCAGTAGAATCATGCCCTCCATCTGAATGGGCAGCACTGATGGCCTTCAAAGCAGCACTCACCGAACCCAACTTTGGAATCTTCAATTCATGGAGAGGAACCAACTGCTGCTACCACTGGTATGGCATCAACTGCGACCCCACCACCCGCCGTGTCGCTGATATCACCCTCGGCGGCCTCACCATCGCCGACCACAACCCTCATGTGACCACCAACCGCACTGCCACCGGCTACATGACTGGCTACATCTCCCCATCAATCTGCAAACTCAAACAGCTTTCCACTCTCACAATCTCAGAGTGGAAGGGCATTTCTGGAAATATCCCTCGTTGCATCACCACCCTCTCACTCCTACAATTCATCGACCTCTCAGGTAACATAATCTCTGGCAAGGTGCCCTACAATATAGGACACCTCACCCAACTCACGGTCCTTAACCTGGCAGACAACCACATCTCAGGGAGGATCCCTAGGACACTGGTGAACCTCAAAAACCTCATGATACTTGATCTACGCAATAATGCAATGGAGGGTCCTATCCCCCCAGACTTTGGGAAACTTAAAAAACTGAACCGGGTTTTTCTTAGCCACAACCGTATAACCGGTCCAATCCCAAGGTCTATTTCAAGCATATACAGCCTGGCCGACATTGATTTGTCACTGAACCGATTATCCGGTTCGGTTCACAAATCATTGGGCCAGATGCCGGTTTTGGACTCACTGAATTTAAAGTACAACAACCTTACGGGGAAGATTCCTTGGACTTTGTTGAGTTCAAGGATAAGCCATTTGGATTTGAGCAGAAACATGTTGAGTGGGGACATTGCTGACGTGTTTGGAGAAAGATCTTATTTTATAAACCTTGATTTGTCGCATAACAACTTGATTGGTTTTATTGCTAAGTCTATGGTTTCTGTTTTTTACATTGGACACCTTGACCTGAGTCATAACAATCTCTGTGGCCCTATTCCACGTGGTGCACCTTTCAATCATCTTCAACCTCCTTCGTTTGATAACAATCGTTGCCTTTGTGGCCACCCGCTTAAACCATGCACTCATCATCATCACACGCGCATCAAGTTATGA 1152 0.4679 MGRSDSAVYAMLLLLIITLVASPVESCPPSEWAALMAFKAALTEPNFGIFNSWRGTNCCYHWYGINCDPTTRRVADITLGGLTIADHNPHVTTNRTATGYMTGYISPSICKLKQLSTLTISEWKGISGNIPRCITTLSLLQFIDLSGNIISGKVPYNIGHLTQLTVLNLADNHISGRIPRTLVNLKNLMILDLRNNAMEGPIPPDFGKLKKLNRVFLSHNRITGPIPRSISSIYSLADIDLSLNRLSGSVHKSLGQMPVLDSLNLKYNNLTGKIPWTLLSSRISHLDLSRNMLSGDIADVFGERSYFINLDLSHNNLIGFIAKSMVSVFYIGHLDLSHNNLCGPIPRGAPFNHLQPPSFDNNRCLCGHPLKPCTHHHHTRIKL 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0195 383 Gene3D Ribonuclease Inhibitor 283 373 IPR032675 -
Lal9g0195 383 Pfam Leucine rich repeat 163 222 IPR001611 GO:0005515
Lal9g0195 383 Pfam Leucine rich repeat N-terminal domain 30 68 IPR013210 -
Lal9g0195 383 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 9 373 - -
Lal9g0195 383 SUPERFAMILY L domain-like 26 373 - -
Lal9g0195 383 Gene3D Ribonuclease Inhibitor 196 276 IPR032675 -
Lal9g0195 383 Gene3D Ribonuclease Inhibitor 29 195 IPR032675 -
Lal9g0195 383 PANTHER DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 9 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0195 Lal-Chr9 1226412 1227563 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0195 90 374 Receptor kinase-like Gene Family AT4G08850 33.758 3.00e-44 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0195 - - lja:Lj3g3v3246320.1 539.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0195 9 1226412 1227563 Lal9g0195 9 1226412 1227563 ECH
Lal2g0193 2 1151431 1152531 Lal9g0195 9 1226412 1227563 ECH
Lal2g0193 2 1151431 1152531 Lal9g0195 9 1226412 1227563 LSH
Lal25g0387 25 2616584 2617690 Lal9g0195 9 1226412 1227563 PCT
Lal9g0195 9 1226412 1227563 Lal25g0387 25 2616584 2617690 PCT