Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0387 ATGAGTGGTGTTTGTTTTATACAACTAACAACAGTAGCAGTGTTACTACTGTCCCTAACCTCCGCCGTGCGGTCATGTCCGCCGTCAGATAGGGCGGCGCTGTTGGCCTTCAAGGCGGCTCTCAAAGAACCGTACCTCGGCATATTCAACTCATGGACCGGCGCCGATTGCTGCCACAAATGGTACGGCGTCAGCTGCGACCAGGAGACCCGCCGCGTCGCCGATATCAACCTCCGAGGCGAGTCGGAAGAGCCGATCTTCAATAAAGCTCACCGCACCGGTTACATGACCGGTTACATCTCTCCGGCGATATGTAAACTCACTCGTCTTTCAAGCTTCACCATCGCAGATTGGAAAGGAATCTCCGGCGAGATACCACGTTGTATTTCCTATTTACCTTTTCTCCGAATCATCGATCTCGTCGGAAACAAAATCTCCGGCACAATCCCGCCGGAAATCGGTAGGCTCCAGCGGTTAACAGTGCTCAACGTTGCCGATAATCTCATCTCCGGCACAATCCCATTGTCACTAACGAACTTAAAGAGCTTGATGCACTTGGATATCCGTAATAACTACATATCTGGGCCTATCCCACACAGCATAGGCCGACTTAGAATGTTAAGTCGGGCTTTGCTGAGTGGAAATAGACTCAACGGAGTTATCCCAGACTCAATTTCTCTTATTTATCGTTTGGCCGATCTAGATCTATCTCGAAATCGAATATCCGGGCCCATTCCGGAATCACTAGGTAAAATGGCTGTCCTTGCAACATTGAATTTAGATTTGAATAAAATTTCTGGACAAATTCCTATAAGTCTTCTAAATTCTGGAATCAGTGACTTAAACTTAAGCCGCAATGCGTTAGAAGGTAATATACCCAATGTGTTCAGTGCAAGATCTTACTTCACAGCTTTGGATTTGTCTTATAATAACTTGAAAGGGTCAATACCAAAATCTATATCATATGCTTCTTATATTGGACACTTAGATTTGAGTCACAACCATCTTTGTGGCCAAATTCCGGTGGGTTCGCCTTTCGATCACCTCGAAGCGTCATCGTTTGTCTACAATGATTGTCTATGTGGGAAGCCACTCAAAGCTTGTTAA 1107 0.4589 MSGVCFIQLTTVAVLLLSLTSAVRSCPPSDRAALLAFKAALKEPYLGIFNSWTGADCCHKWYGVSCDQETRRVADINLRGESEEPIFNKAHRTGYMTGYISPAICKLTRLSSFTIADWKGISGEIPRCISYLPFLRIIDLVGNKISGTIPPEIGRLQRLTVLNVADNLISGTIPLSLTNLKSLMHLDIRNNYISGPIPHSIGRLRMLSRALLSGNRLNGVIPDSISLIYRLADLDLSRNRISGPIPESLGKMAVLATLNLDLNKISGQIPISLLNSGISDLNLSRNALEGNIPNVFSARSYFTALDLSYNNLKGSIPKSISYASYIGHLDLSHNHLCGQIPVGSPFDHLEASSFVYNDCLCGKPLKAC 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0387 368 Pfam Leucine rich repeat 158 217 IPR001611 GO:0005515
Lal25g0387 368 Gene3D Ribonuclease Inhibitor 23 93 IPR032675 -
Lal25g0387 368 Gene3D Ribonuclease Inhibitor 94 368 IPR032675 -
Lal25g0387 368 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 9 368 - -
Lal25g0387 368 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Lal25g0387 368 SUPERFAMILY L domain-like 25 366 - -
Lal25g0387 368 PANTHER DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 9 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0387 Lal-Chr25 2616584 2617690 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0387 121 368 Receptor kinase-like Gene Family AT3G56370 32.990 1.52e-36 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0387 - - gmx:100804739 617.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0387 25 2616584 2617690 Lal25g0387 25 2616584 2617690 ECH
Lal25g0387 25 2616584 2617690 Lal2g0193 2 1151431 1152531 PCT
Lal25g0387 25 2616584 2617690 Lal9g0195 9 1226412 1227563 PCT
Lal2g0193 2 1151431 1152531 Lal25g0387 25 2616584 2617690 PCT
Lal9g0195 9 1226412 1227563 Lal25g0387 25 2616584 2617690 PCT