Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0188 ATGGCACTCAACAATGGCCTTTTCATTCTTGGCTTTGTTGCTTTTGTTCTTGCAATGAGCATTTCTAAAGTGAACTGCATCGAAGCTGTTGCTGGAATTGACCCAATTATTGACATAGCTTCTCTAAATCGACAAAGTTTCCCTCCTGGCTTCATCTTTGGAGCGGGTTCCGCATCATACCAGTTCGAAGGTGCAGCAAATGAAGGTGGTAGAGGACCAAGTGTATGGGATACCTTCACTCATGAATATCCAGATAAGATACAAGATAGAAGCAATGGAGATGTAGCCATTGACCAATATCACAAGTACAAGGAAGATGTTGCGCTTATGAAGGATATGAACTTGGATTCATACAGATTCTCAATATCTTGGTCTAGAATACTTCCAAATGGAAAAGTAAGTGGGGGCATAAATCAAGAAGGAGTCAACTATTACAACAACCTCATCAACGAGTTATTGGCAAATGGTATAAAACCACTTGTGACTCTTTTCCACTGGGATCTTCCACAAGGCTTAGAAGATGAATATGGTGGCTTCTTAAGCCCTCTCATTGTGAAAGATTTTCAGGATTATGCGGAAATTTGCTTCAAGGAATTCGGTGATAGAGTGAAGTTTTGGGTCACTTTGAATGAGCCATGGAGTTATAGCAGTAATGGGTATGCAAATGGAAGAATGGCACCAGGTCGTTGTTCTTCTTGGCTGAACCCAAATTGCACTGGTGGTGACTCTTCAATAGAGCCCTATATAGTTACACACTATCAACTTCTTGCTCATTCAGCAGCTGTTCGTGTGTACAAGACTAAGTTTCAGGAATCTCAAAAAGGTTCAATAGGCATAACCTTGGTAGCTAATTGGTATCTGCCACTCTCAGATACAAAATTAGATCAAAAGGCTGCTGAAAGAGCAATTGACTTCATGTATGGATGGTATATGGATCCACTAACATTTGGAGACTATCCAAAAAGCATGCGATCCCTAGTAAGAACACGTTTGCCAAAGTTCACAGCAGAGCAAAGCAAACAACTGAAGGGTTCTTTTGATTTCATTGGTCTAAACTATTACTCCTCAACCTATGCCTCGGATGCACCTCATCTAAGCAATGCTAGACCTAGCTATGCAACAGATGCTTTATTTGATCCTGCATTTGAGCGCAATGGGAAACCCATCGGTATAAAGGTTGCTTCAGATTGGTTGTACGTTTATCCACGAGGAATTAGAGACCTTTTGTTATACACCAAGGAGAAATACAATAACCCCTTAATTTACATTACTGAAAATGGTATAAATGAGTTTAATGATCCAACACTATCGGTGGAGGAAGCACTTATGGATACATTTAGAATTGATTATCATTATCGTCATCTGTTTTATCTTCGATCTGCAATTAGGAGTGGGGCAAATGTAAAGGGATATTATGTATGGTCTTTATTCGACAATTTTGAATGGTTCTCGGGTTATACAGTTCGATTTGGAATGACCTTCGTGGATTACAAAAATGAAAATAAACGATACAAAAAGTTATCTGCATTATGGTTCAAGAAGTTTCTGCAGAAAGAAACCAGACTTTATGATTCTAGTAAATGA 1584 0.3914 MALNNGLFILGFVAFVLAMSISKVNCIEAVAGIDPIIDIASLNRQSFPPGFIFGAGSASYQFEGAANEGGRGPSVWDTFTHEYPDKIQDRSNGDVAIDQYHKYKEDVALMKDMNLDSYRFSISWSRILPNGKVSGGINQEGVNYYNNLINELLANGIKPLVTLFHWDLPQGLEDEYGGFLSPLIVKDFQDYAEICFKEFGDRVKFWVTLNEPWSYSSNGYANGRMAPGRCSSWLNPNCTGGDSSIEPYIVTHYQLLAHSAAVRVYKTKFQESQKGSIGITLVANWYLPLSDTKLDQKAAERAIDFMYGWYMDPLTFGDYPKSMRSLVRTRLPKFTAEQSKQLKGSFDFIGLNYYSSTYASDAPHLSNARPSYATDALFDPAFERNGKPIGIKVASDWLYVYPRGIRDLLLYTKEKYNNPLIYITENGINEFNDPTLSVEEALMDTFRIDYHYRHLFYLRSAIRSGANVKGYYVWSLFDNFEWFSGYTVRFGMTFVDYKNENKRYKKLSALWFKKFLQKETRLYDSSK 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0188 527 Gene3D Glycosidases 33 518 - -
Lal9g0188 527 PANTHER GLYCOSIDE HYDROLASE FAMILY 1 PROTEIN 4 523 - -
Lal9g0188 527 PANTHER GLYCOSYL HYDROLASE 4 523 IPR001360 GO:0004553|GO:0005975
Lal9g0188 527 PRINTS Glycosyl hydrolase family 1 signature 345 359 IPR001360 GO:0004553|GO:0005975
Lal9g0188 527 PRINTS Glycosyl hydrolase family 1 signature 421 429 IPR001360 GO:0004553|GO:0005975
Lal9g0188 527 PRINTS Glycosyl hydrolase family 1 signature 444 455 IPR001360 GO:0004553|GO:0005975
Lal9g0188 527 PRINTS Glycosyl hydrolase family 1 signature 465 482 IPR001360 GO:0004553|GO:0005975
Lal9g0188 527 PRINTS Glycosyl hydrolase family 1 signature 489 501 IPR001360 GO:0004553|GO:0005975
Lal9g0188 527 SUPERFAMILY (Trans)glycosidases 37 517 IPR017853 -
Lal9g0188 527 ProSitePatterns Glycosyl hydrolases family 1 active site. 421 429 IPR018120 -
Lal9g0188 527 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 51 65 IPR033132 -
Lal9g0188 527 Pfam Glycosyl hydrolase family 1 44 519 IPR001360 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0188 Lal-Chr9 1181404 1184559 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0188 42 521 Glycoside Hydrolase AT5G44640 56.133 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0188 - K01188 gmx:100813623 907.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0188 9 1181404 1184559 Lal9g0188 9 1181404 1184559 ECH
Lal2g0185 2 1091298 1098494 Lal9g0188 9 1181404 1184559 ECH