Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0183 ATGGGGAAGCCTTTGTTTTATGAGATCTTGGAAAAACCAGCCACAAGTTGTATTATAGGAATTTGCAGTGCAATTTGGTTCTACATCCAGAAGAAAAATATTGGGTACTCACATGTGGGTTTGAGTTATGAGAGTGCAATTGAGGGGCATTATTGGAGGATCATCACCTCTGCATTTTCACATATAAGTGTTATTCATCTTGTTTTTAACATGAGTGCACTTTGGAGTCTTGGGGTGGTAGAGCAATTGGATCACATGGGCCTTGGTATTGGTTACTATTTGCATTACACACTTGTGATGGTTATTTTGTCAGGAGTGTTGGTTCTGGCCATATACCACCTATTGATTCAAAGATTCAATATTGAGTATTTTAGTCGAGTGACGGCTATTGGATATTCCTGTGTTGTTTTTGGCTGGATGACAATTCTTTCTGTGAAGCAGCCTTCTACCAAGCTGGAACTTTTTGGGTTCCTTTCTCTTCCTATCAGTTTCGCGCCAGTTGAATCGCTTGTTTTAACCTCAATTATTGTTCCTCAGGCGAGTTTTATCGGCCATTTATCAGGGATTGTTGTTGGATATGCTATAGCATGGGGTTTGATTCATGGGATGAATAGCTACTGGACACTTTCCTTATTGGGTTGGATTGCAGTGGTCTTTGCTTGGAGTTTGAAGAAATCTGGTGCAGTTGACCTCAACTTTCTTGAGATTGAATCTGTAACTGACCCTTCTTTACCAGTATGGTTTTTGGCATCAGGTAATGGCAGAACGCCACATATGACTGCATTACCAAATGGAGATGTTGACATTGTCTAA 813 0.4034 MGKPLFYEILEKPATSCIIGICSAIWFYIQKKNIGYSHVGLSYESAIEGHYWRIITSAFSHISVIHLVFNMSALWSLGVVEQLDHMGLGIGYYLHYTLVMVILSGVLVLAIYHLLIQRFNIEYFSRVTAIGYSCVVFGWMTILSVKQPSTKLELFGFLSLPISFAPVESLVLTSIIVPQASFIGHLSGIVVGYAIAWGLIHGMNSYWTLSLLGWIAVVFAWSLKKSGAVDLNFLEIESVTDPSLPVWFLASGNGRTPHMTALPNGDVDIV 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0183 270 Pfam Rhomboid family 48 201 IPR022764 GO:0004252|GO:0016021
Lal9g0183 270 Gene3D - 10 198 IPR035952 -
Lal9g0183 270 SUPERFAMILY Rhomboid-like 13 199 IPR035952 -
Lal9g0183 270 PANTHER RHOMBOID PROTEASE 1 270 - -
Lal9g0183 270 PANTHER RHOMBOID-LIKE PROTEIN 13 1 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0183 Lal-Chr9 1141283 1142095 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0183 - - gmx:100818954 476.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0277 1 1626723 1628020 Lal9g0183 9 1141283 1142095 LSH
Lal2g0173 2 1035287 1036075 Lal9g0183 9 1141283 1142095 LSH