Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0277 ATGAAAGCATTGTCGGTGTTAACTAATATTATTTGGGCTACACAAAGCTTAGGCAATCGAAGTACTGAAATCGTCTTCTACTCTAGTCTAGCAACTAAAGGAGTGCCAGATTGGGATTTTTTTTGTGAAATGGGGAAGCCTTTGTTTTATGAGATCTTGGAAAAACCAGCCACAAGTTGTATTATAGGAATTTGCAGTGCTATCTGGTTCTACATTCAGAAGAAAAATATTGGGTATTCACATGTTGGTCTGAGTTATGAGACTGCAATTGAGGGGCATTATTGGAGAATCATCACCTCTGCATTTTCACATATAAGTGCTATTCATCTTGTTTTTAACATGAGTGCACTTTGGAGTCTTGGGGTGGTAGAGCAATTGGATCACATGGGCCTTGGTGTTGGTTACTATTTGCAATACACACTTGTGATGGTTGTTTTATCAGGACTACTGGTTCTGGCCATGTACCACTTATTGATTCAAAGATTCAATATTGAGTATTTTCGTCGAGTGACCGCTGTTGGGTACTCCTGTGTTGTTTTTGGCTGGATGACAATTCTTTCTGTGAAGCAACCTTCTTCCAAGTTGGAACTTTTTGGACTCCTTTCTCTTCCTATCAGTTTTGCGCCATTTGAATCGCTTGTTTTCACCTCAATTATTGTTCCTCAGGCGAGTTTTATTGGCCATTTATCAGGGATTGTTGTTGGATATGCTATAGCATGGGGTTTGATTCATGGGATGAATAGCTACTGGGCGCTTTCCTTGTTGGGTTGGATTGCACTTGTCTTTGTTTGGAGTTTGAAGAAATCTGGTGCTGTTGACCTCAACTTTCTCGAGATTGAATCTGTAACTGATCCTTCCTTACCGGTACGGTTTTTGGCGTCAGGTAATGGCAGAACACTACAGATGACTGCATTGCCAAATGGAAATGTTGACATTGTCTGA 942 0.4045 MKALSVLTNIIWATQSLGNRSTEIVFYSSLATKGVPDWDFFCEMGKPLFYEILEKPATSCIIGICSAIWFYIQKKNIGYSHVGLSYETAIEGHYWRIITSAFSHISAIHLVFNMSALWSLGVVEQLDHMGLGVGYYLQYTLVMVVLSGLLVLAMYHLLIQRFNIEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLELFGLLSLPISFAPFESLVFTSIIVPQASFIGHLSGIVVGYAIAWGLIHGMNSYWALSLLGWIALVFVWSLKKSGAVDLNFLEIESVTDPSLPVRFLASGNGRTLQMTALPNGNVDIV 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0277 313 Gene3D - 53 241 IPR035952 -
Lal1g0277 313 SUPERFAMILY Rhomboid-like 56 242 IPR035952 -
Lal1g0277 313 Pfam Rhomboid family 91 244 IPR022764 GO:0004252|GO:0016021
Lal1g0277 313 PANTHER RHOMBOID PROTEASE 44 313 - -
Lal1g0277 313 PANTHER RHOMBOID-LIKE PROTEIN 13 44 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0277 Lal-Chr1 1626723 1628020 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0277 - - gmx:100818954 496.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0277 1 1626723 1628020 Lal2g0173 2 1035287 1036075 LSH
Lal1g0277 1 1626723 1628020 Lal9g0183 9 1141283 1142095 LSH