Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0178 ATGACGAGCAAAGGAAAGGAAAGAGATGTGGGGGAAGTTTTGGTGAAATCACTACAGAATACTAAATACTCAATTAATGAAAAACTAGAGAACAGCAGTATCAATCTTTTTGGTCAAAAGTCAAAAGTGTCATCAGAATCTCTAGCTGCTACACAGGATGATATAGCTGGTAAACATAGTGAAGATTATAATGAAATGGATTCAGATGGTTCAGAATCATCTGATCAGGATGAAGCTGATGCTATAACAGATAGGGAAGCCTCTGGTTCTGATGATGAAGATGGTGATGCATCTGATAGTAATGCTACTCCTGGAGACCACTTAAAAGAGCATATTGAGTTTATTGATGGAAGACGAAGAAGGGGAGTGATCTTTGGAAGTGGTGTTAATCAAAATGATCTGACGGATTTAGAAGAAGAAGATGGTGCTGCCAGTGATGGTGTAGCATCTTCTGATTCAGAATCTTCAAAACAGGAGGAGGAGGATGACTATAGTGATGATGGCCCAGATGAAGATGATGATATGGGAAATGTTTCAAAGTGGAAAGAATCTTTGGCAGAAAGAACTCTTTCACGGAAATCTCCTAGTTTGGTGCAACTTGTCTATGGGGATTCTACTGTCAATTCGACCTCTATAAACAATGAAAATGAATATAGTGAGGATGATGGAAGTGAAGATGACTTTTTTAAGCCTATAGAAGAAGTTAAAAAGCAGAGCATGACAGATGGATTTAATGATGGAACCGCCAACATTGAGGATTGTTCCAAGCTTCCACATTTTGTTGATCGGAAATGGGATGATAAAGATAATGAGGATATTCACAATCGTTTTGTAACTGGAAATTTGGCAAAAGCGGCACTCCGAAATCCATTACCAAAATCTAAGACTGAAGAGGAGAATGATGATTTGTATGGTGATTTTGAAGATTTAGAAACTGGAGAAAAATACGAGAATCATCAGACGGATGATGCTTTTGTTGCAACAATACCCAAGGGGGATGATTTGGAAGCTGAGCAGCGACGGCTTAAGAAACTTGCTCTTCGTGCGAAATTTGATTCTCAATATCCTTTTTCTGTTTCTCTCTTGATATACTTACTTAACTGGAAAATATACTTTTTGCTTTCTGAACCTCCACCAAAATGGAAAGGAAAAATGGTTTCTCAAAGTAAGGGGATTAAAGCATTTTCTTTGTGTTATCCTAAGAACATAAGAAATTTGAGATGCTTATGTAGACAGACTTTGATTGATTTTCTGATGCTATCTTATTGTAGCTTTGACAAAAAAACAAAAAAAAAATGTGTTGTGACTGTAATTCATTCGTGGAGGTGGGGTGAGCAGAGAAAACAAGTGCAATATGGCATTCTTTGTAACCTTAATTTCTATCCACATATGGTGATGACTCTGGGTCAGCTGAGGAAGATACTGGTAATGAAAATGAGGTCAAATTCCATCGTGGTCAAGCTAATGAAATTGAAGGAAGAGATTGAGCTTCGGAAACAAATGAATATAGCTGAACTCAATGAGCTTGATGAGACTGCCAGAATAGAGACAGAAGGCTTCCGTACTGGGACATACCTTAGATTGGAGATTCATGATGTTCCTTCTGAGATGGTTGAATACTTTGACCCCTACCATCCAATATTGGTGGGAGGGGTTGGTCTCGGGGAGGAAAATGTTGGATACATGCAGGCCAGGTTAAAGCGGCACAGATGGCACAAGAAAGTGCTAAAGACTAGAGATCCAATTATTGTTTCTGTTGGATGGAGGCGTTACCAGACAACACCAGTTTATGCTATTGAGGACATCAATGGAAGGCATCGTATGCTAAAATATACTCCAGAGCACATGCATTGCCTCGCTATGTTTTGGGGCCCACTTGCCCCTCCCAGCACTGGGATAGTTGCTGTTCAGAATTTATCGAACAATCAGGCAACATTTAGGATCACTGCAACTGCTGTTGTAGTTGAGTTTAAACACGAAGCAAGAATAGTGAAGAAAATCAAATTGGTTGGTTACCCGTGCAAGATATTCAAAAAAACAGCACTTATAAAGGATATGTTTACTTCAGATCTTGAAGTAGCTCGGTTTGAAGGTGCATCTATTCGAACAGTCAGTGGGATCAGGGGGCAGGTCAAGAAGGTTGCAAAAGAAGAGATAGGTAACCAACCAAAAAGGAAGGGTGGGCAAACAAAAGAAGGAATTGCTAGGTGCACTTTTGAAGACAAAATTCTGATGAGTGATATTGTTTTCCTGCGTGCATGGACACAAGTTGAAGTTCCCCAGTTCTACAATCCATTGACAACTGCATTGCAGCCTCGTGACAAGACTTGGCAAGGAATGAGAACTGTTGCAGAATTGAGAAGAGAAAATAATCTTTCGATACCTGTAAACAAAGATTCACTTTACAAAAAAATTGAAAGGAAACAAAGGAAGTTCAATCCAGTGGTGATTCCCAAGTCTCTACAGGCAAGCCTTCCCTTTGAATCAAAACCCAAGGATATTCCCAAGCGAAAGAGACCATTACTTGAAGAAAGAAGGAAAAAGGGTGTTGTGATGGATCCTCATGAGCGCAAAGTTCATGCTCTTGTTCAACAATACCAGTTAATTAGAAATGATAAGATGAAGAAGCGAAAGGTTAATGAAGAGAAAAAGAGGAAGGTACTTGAAGTAGAGAGAGCAAAAGAGGAGGAGTTGTCTAAAAAGCGCCGAAGAGAGGAAAGACGAGTGAAATACCGAGCCCAAGACAAGCAAAATAAGAAAATCCGTAGAGCATAG 2775 0.395 MTSKGKERDVGEVLVKSLQNTKYSINEKLENSSINLFGQKSKVSSESLAATQDDIAGKHSEDYNEMDSDGSESSDQDEADAITDREASGSDDEDGDASDSNATPGDHLKEHIEFIDGRRRRGVIFGSGVNQNDLTDLEEEDGAASDGVASSDSESSKQEEEDDYSDDGPDEDDDMGNVSKWKESLAERTLSRKSPSLVQLVYGDSTVNSTSINNENEYSEDDGSEDDFFKPIEEVKKQSMTDGFNDGTANIEDCSKLPHFVDRKWDDKDNEDIHNRFVTGNLAKAALRNPLPKSKTEEENDDLYGDFEDLETGEKYENHQTDDAFVATIPKGDDLEAEQRRLKKLALRAKFDSQYPFSVSLLIYLLNWKIYFLLSEPPPKWKGKMVSQSKGIKAFSLCYPKNIRNLRCLCRQTLIDFLMLSYCSFDKKTKKKCVVTVIHSWRWGEQRKQVQYGILCNLNFYPHMVMTLGQLRKILVMKMRSNSIVVKLMKLKEEIELRKQMNIAELNELDETARIETEGFRTGTYLRLEIHDVPSEMVEYFDPYHPILVGGVGLGEENVGYMQARLKRHRWHKKVLKTRDPIIVSVGWRRYQTTPVYAIEDINGRHRMLKYTPEHMHCLAMFWGPLAPPSTGIVAVQNLSNNQATFRITATAVVVEFKHEARIVKKIKLVGYPCKIFKKTALIKDMFTSDLEVARFEGASIRTVSGIRGQVKKVAKEEIGNQPKRKGGQTKEGIARCTFEDKILMSDIVFLRAWTQVEVPQFYNPLTTALQPRDKTWQGMRTVAELRRENNLSIPVNKDSLYKKIERKQRKFNPVVIPKSLQASLPFESKPKDIPKRKRPLLEERRKKGVVMDPHERKVHALVQQYQLIRNDKMKKRKVNEEKKRKVLEVERAKEEELSKKRRREERRVKYRAQDKQNKKIRRA 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0178 924 Coils Coil 871 908 - -
Lal9g0178 924 MobiDBLite consensus disorder prediction 156 173 - -
Lal9g0178 924 MobiDBLite consensus disorder prediction 873 924 - -
Lal9g0178 924 MobiDBLite consensus disorder prediction 873 913 - -
Lal9g0178 924 PANTHER RIBOSOME BIOGENESIS PROTEIN 490 916 IPR039761 GO:0042254
Lal9g0178 924 PANTHER RIBOSOME BIOGENESIS PROTEIN 4 356 IPR039761 GO:0042254
Lal9g0178 924 PANTHER BNAC08G44910D PROTEIN 490 916 - -
Lal9g0178 924 PANTHER BNAC08G44910D PROTEIN 4 356 - -
Lal9g0178 924 MobiDBLite consensus disorder prediction 174 189 - -
Lal9g0178 924 MobiDBLite consensus disorder prediction 42 114 - -
Lal9g0178 924 MobiDBLite consensus disorder prediction 128 244 - -
Lal9g0178 924 Pfam 40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal 502 758 IPR007034 -
Lal9g0178 924 MobiDBLite consensus disorder prediction 190 217 - -
Lal9g0178 924 SMART DUF663_2 464 757 IPR007034 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0178 Lal-Chr9 1103328 1111653 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0178 K14569 - gmx:100792176 712.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0271 1 1587870 1595979 Lal9g0178 9 1103328 1111653 LSH