Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0148 ATGTTCAAGAGTTCCTTCTCAAAGAAGGGTCGATGGCATAGCAGGGTTATGTCTATTACTGCTATTGAGGATGACCTTGATGCTGAAGAGTTGCAAGCTGTTGATTCTTTTCGCCAAGCTCTCATCCTAGATGAGCTCTTACCATCAAAACATGATGATCATCATATGATGCTAAGATTCTTGAGAGCAAGGAAGTTTGATATTGAGAAATCAAAACAAATGTGGGCTGATATGCTTCAGTGGAGGAAGGAGTTTGGTGCTGACACAATCATGGAGGATTTTGAATTCAAAGAGATAGATGAAGTTCTAAAATACTATCCACAAGGGCATCATGGAGTTGATAAGGATGGATCACCTGTTTACATTGAAAAATTGGGTCAGGTTGATCCTCACAAGCTGATGCAAGTAACAACTATGGAGCACTATCTTAAGTATCATGTAAGAGAGTTTGAGAGAACCTTCAATGTTAAGTTACCTGCATGTTCAATTGCAGCAAAGAAGCACATTGATCAAAGCACAACTATCTTGGATGTGCAAGGAGTGGGTCTTAAAAGTATGAACAAAGCTGCAAGGGATCTCCTTCAGAGACTTCAGAAAATTGATGGTGACAACTATCCTGAGTCTCTGAAACGTATGTTCATCATCAATGCTGGCTCTGGATTTAGGTTGCTGTGGAACACTGTTAAGTCGTTTCTCGATCCCAAGACCACCGCGAAAATTCACGTCCTAGGTAACAAATACCAAAGCAAGTTACTTGAAATCATTGATGCCAGTGAGCTGCCAGAGTTTTTGGGAGGTACTTGTACTTGTGCAGATAAAGGTGGTTGTATGCTTTCTGACAAGGGACCATGGAATGATCCAGATATCTTAAAGATGGTTCAAGATGGTGAGGGAAAATGCAGGAGGAAAAACTTATCAGCCATTGAGAAAATCAATGAATATGAAACAACATATCATAAGCTTGATACTCGTTATTCTGCATCTAATATTAAGGAACACAAGGAAGCACACCATGTAGAGCATCCTGAACCATGTGCTAGTCTAGAAGTCTCAAATCAGTGTAATGCATATCAGTTCGTCCCAGTGAATGACAAGACAGTCAATACAGCTTGGAGTAAAGCAGTACAAGATCATCAACTTGAACCTTCTAAAGATTATTTCCCTGAGAGTCCATGCAAAGCTTCTGACAGGTTCAGCAATCCATTTTTTGGTGGAATCATGGCCGTTGCAACGGGAATTATAACCATGGTGCGTTTGACAAAGAACATGCCTAAGAAAACCACAGGAGTATATTATGATGACACTAAGATGAAAGCAGAACCTACCATTTCCATTGATGATCACATGGATATGATGAAGCGCATGGTTGAACTAGAAGAGAAGGTCAATGTCCTCAGCATGAGACCAGAAATGCCACCAGAAAAGGAGGAACTACTGAATAATGCTCTCACTAGAGTCACCGCTCTCGAACAAGAGTTGGCTTCGGCCATAGAGGCACTTGATGATGTCCTTGCTAAGCAAGTGGAGCTCCAAGCCCACATTGAAGACAGGAAAAAGAAGAAGAAGAAGAAGAAGCTGTTCTGCTTCCACTGGTAA 1596 0.411 MFKSSFSKKGRWHSRVMSITAIEDDLDAEELQAVDSFRQALILDELLPSKHDDHHMMLRFLRARKFDIEKSKQMWADMLQWRKEFGADTIMEDFEFKEIDEVLKYYPQGHHGVDKDGSPVYIEKLGQVDPHKLMQVTTMEHYLKYHVREFERTFNVKLPACSIAAKKHIDQSTTILDVQGVGLKSMNKAARDLLQRLQKIDGDNYPESLKRMFIINAGSGFRLLWNTVKSFLDPKTTAKIHVLGNKYQSKLLEIIDASELPEFLGGTCTCADKGGCMLSDKGPWNDPDILKMVQDGEGKCRRKNLSAIEKINEYETTYHKLDTRYSASNIKEHKEAHHVEHPEPCASLEVSNQCNAYQFVPVNDKTVNTAWSKAVQDHQLEPSKDYFPESPCKASDRFSNPFFGGIMAVATGIITMVRLTKNMPKKTTGVYYDDTKMKAEPTISIDDHMDMMKRMVELEEKVNVLSMRPEMPPEKEELLNNALTRVTALEQELASAIEALDDVLAKQVELQAHIEDRKKKKKKKKLFCFHW 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0148 531 CDD SEC14 99 267 IPR001251 -
Lal9g0148 531 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 98 272 IPR001251 -
Lal9g0148 531 Coils Coil 479 506 - -
Lal9g0148 531 SMART CRAL_TRIO_N_2 53 78 IPR011074 -
Lal9g0148 531 Pfam CRAL/TRIO, N-terminal domain 50 77 IPR011074 -
Lal9g0148 531 PRINTS Cellular retinaldehyde-binding protein signature 56 78 - -
Lal9g0148 531 PRINTS Cellular retinaldehyde-binding protein signature 225 244 - -
Lal9g0148 531 PRINTS Cellular retinaldehyde-binding protein signature 258 267 - -
Lal9g0148 531 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 2 523 - -
Lal9g0148 531 Gene3D - 7 85 - -
Lal9g0148 531 PANTHER SEC14P-LIKE PHOSPHATIDYLINOSITOL TRANSFER FAMILY PROTEIN 2 523 - -
Lal9g0148 531 Gene3D - 86 297 IPR036865 -
Lal9g0148 531 SUPERFAMILY CRAL/TRIO N-terminal domain 23 94 IPR036273 -
Lal9g0148 531 Pfam CRAL/TRIO domain 104 266 IPR001251 -
Lal9g0148 531 SUPERFAMILY CRAL/TRIO domain 98 294 IPR036865 -
Lal9g0148 531 SMART sec14_4 98 269 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0148 Lal-Chr9 942729 946776 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0148 32 263 Acyl Lipid Metabolism Gene Families AT5G47730 26.971 1.19e-19 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0148 - - gmx:100802579 729.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0211 1 1265728 1273166 Lal9g0148 9 942729 946776 LSH