Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0211 ATGGCAACAAATGGTGCAGCACTTCCATCAATTGTAAGAACAGAACAAGTTCTTCACATGAACGATGGTGTGGGAGATACAAGCTATGCAAAGAACTCTTCCCATCAAAGAAGTGGAGTATTAAAAGGGAAACCAATACTAGAAGAAAGTGTGAGGAAGCTTTATTGTAACATGCTTCCTAAGTGTTTGAAAGTGGCTGATCTAGGTTGTGCTTCAGGACCAAATGCACTTATGGTTGTAAATGATATCATTGAAATTGTTGAGACCACTAGCTTCAATTTGAATCTAAGTGCACCTGTTTTCCAATTTTATTTGAATGATTTACCTTCCAATGATTTCAATACCATTTTCAAATCACTAGCTCAGTTCTATGATGCTTTAGAGGAAAATAAGGGACCTGGGTTTGGTCCATGTTTCATTAATGCAACTCCAGGGACATTCTATAAGAGGCTCTTTCCCAATAACTCCATACATTTTGTTCATTCCTCTTATAGTCTACACTGGCTTTCTCAGCCACCAAAGGAGTTGACTAATGGAGCAGAAACACTTAACAAAGACAACATTTATGTGACAAGCACAATTCCTCCAGCAACGCACAAAGCATACCTTAGGCAATTCCAACATGACTTCAAACTGTTTCTGAAATCACGTTCAGAGGAACTAGTGCCTGGTGGTGTTATGTTTCTCACATTTGTTGGAAGAGAGGACATTCCTCAAATAAGAACTGTCATTGGGCTACTTGGCATGGTTCTAAATGACATGGTAGTAGAGAATTTGATTGAAGAGGTAAAATTGGAATCCTTTAATATGCCAATGTATGGCCCTACAGCAGAGGAAGCTAAAGCAGTTATTGAGGAAGAAGGATCGTTCACTATTCAGAGATTGGAATCTATTATAGTGGGTTGGGATGCAAACATAAATGAGGATGATCTTGATGAAAATATGAGATGCGAGTTCATAGCCAAAAACTTCAGAGCTATTACAGAAACTCTTTTGAAGGCTCGTTTTGGGGAAGGGTCTGGCTCCTCTCGTAATGGAGAGGCTAGTGAGCCCCCAGATTGCGACACGTGTCTTGAAATTGAATATACAGAGGATGAAAAGAAGACGAGGCTTGGGTCTTTAAAGAAGGTAGCAATCAGTGCATCTTTTAAGTTCAAGAGTTCCTTCACAAAGAAGGGGCGAAGGCATAACAGGGTTATGTGTATTGCTTTTGAGGATGACCTTGATGCAGAAGAGTTGCAAGCTGTTGATGCTTTTCGCCAACGTCTCATCTTCGAGGAACTCTTATCCTCAGAACATGATGATCATCATATGATGCTAAGATTCTTGAGAGCAAGAAAGTTTGACATTGAGAAATCTAAACAAATGTGGGCAGATATGCTTCGGTGGAGGAGGGAGTTTGGTGCTGACACCATCATGGAGGATTTTGAATTTGAAGAGATAGATGAAGTTCTAAAATACTATCCTCAAGGGAATCATGGAGTTGATAAGGATGGACGACCTATTTACATCGAAAAGTTGGGACAGGTTGACCCTAACAAGCTGTTGCAAGTAACAACTATGGACCGCTATCTTAAGTACCATGTAAGAGAGTTTGAGAAGACCTTCACTGTTAAGTTACCTGCATGTTCAATTGCAGCAAAGAAACACATTGACCAAAGCACAACTATCTTGGATGTGCAAGGAGTGGGTCTTAAAAGTATGAACAAAGCTGCAAGGGATCTTCTTCAAAGGATTCAGAGAATTGACGGTGACAACTATCCTGAGTCCCTGAACCGTATGTTCATCATCAATGCTGGTTCTGGATTTAGGTTGTTGTGGAACACTATAAAGTCATTCCTTGATCCCAAGACCATGGCGAAAATCCATGTTCTAGGTAACAAATACGAGAGCAAGTTGCTTGAAATCATTGATGCGCCAGAATTCTTGGGAGGTACTTGCACCTGTGCAGATAAAGGTGGTTGTATGTATTCTGACAAGGGACCGTGGAATGATCCAGATATCTTGAAGGTCACAAAAGAATGTAATGCATATCAGTTTGTCGCAGTGGTTGACAAGCCGGTCAATACAACTTCCAACAAAGCACTACAAAATGGTCAACTTGCACGTTCTAAAGCCGCACATTATTTCCGGGAGAGCCCTCGCAAGGCTTCTGTTGGGTTTAGAAAACCATTTCTTGGTGGAATCATGGCGGTTGTAATGGGAATTGTGACCATGGTGCGCCTGACAAAGAACATGCCTAAGAACATCGCTGCAGTCAGACTGTATTGTGAGTCAGCAGTATATTATAGTGCCACTATGATGAATGCAACACCTACCATTTCCATTGATGATCACACGGCTATGATGAAGCGCATGGCTGAACTAGAAGAGAAGGTTAATGTCCTCAACATGAGACCACTCATGCCACTTGAAAAGGAAGAACTACTCAATAATGCTCTAAGCAGAGTTACCACTCTGGAGCAGGAGTTGGCTTCATCCAAAAAGGCACTTGATTATGCCCTTGCTAAACAAGTGGAGCTCCAAGCCTACATTGACATGAAAAATAAGAAGAAGAAGCTGGTATGTCATTCGAACTTTGACACTGATACTTCGGCTTCCACTGGTAAAGTGATTGTGTATATTCACAAATATTTAACATTAGTAACAGTTGTGAAGTTGGTGGCGTTTCTCAATCATCAGCCCCATTGGATGCTATTGCATTCAGCTAGCTAG 2715 0.4107 MATNGAALPSIVRTEQVLHMNDGVGDTSYAKNSSHQRSGVLKGKPILEESVRKLYCNMLPKCLKVADLGCASGPNALMVVNDIIEIVETTSFNLNLSAPVFQFYLNDLPSNDFNTIFKSLAQFYDALEENKGPGFGPCFINATPGTFYKRLFPNNSIHFVHSSYSLHWLSQPPKELTNGAETLNKDNIYVTSTIPPATHKAYLRQFQHDFKLFLKSRSEELVPGGVMFLTFVGREDIPQIRTVIGLLGMVLNDMVVENLIEEVKLESFNMPMYGPTAEEAKAVIEEEGSFTIQRLESIIVGWDANINEDDLDENMRCEFIAKNFRAITETLLKARFGEGSGSSRNGEASEPPDCDTCLEIEYTEDEKKTRLGSLKKVAISASFKFKSSFTKKGRRHNRVMCIAFEDDLDAEELQAVDAFRQRLIFEELLSSEHDDHHMMLRFLRARKFDIEKSKQMWADMLRWRREFGADTIMEDFEFEEIDEVLKYYPQGNHGVDKDGRPIYIEKLGQVDPNKLLQVTTMDRYLKYHVREFEKTFTVKLPACSIAAKKHIDQSTTILDVQGVGLKSMNKAARDLLQRIQRIDGDNYPESLNRMFIINAGSGFRLLWNTIKSFLDPKTMAKIHVLGNKYESKLLEIIDAPEFLGGTCTCADKGGCMYSDKGPWNDPDILKVTKECNAYQFVAVVDKPVNTTSNKALQNGQLARSKAAHYFRESPRKASVGFRKPFLGGIMAVVMGIVTMVRLTKNMPKNIAAVRLYCESAVYYSATMMNATPTISIDDHTAMMKRMAELEEKVNVLNMRPLMPLEKEELLNNALSRVTTLEQELASSKKALDYALAKQVELQAYIDMKNKKKKLVCHSNFDTDTSASTGKVIVYIHKYLTLVTVVKLVAFLNHQPHWMLLHSAS 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0211 904 Pfam CRAL/TRIO, N-terminal domain 429 459 IPR011074 -
Lal1g0211 904 Gene3D Vaccinia Virus protein VP39 32 301 IPR029063 -
Lal1g0211 904 CDD SEC14 485 646 IPR001251 -
Lal1g0211 904 PRINTS Cellular retinaldehyde-binding protein signature 438 460 - -
Lal1g0211 904 PRINTS Cellular retinaldehyde-binding protein signature 607 626 - -
Lal1g0211 904 Pfam SAM dependent carboxyl methyltransferase 50 338 IPR005299 GO:0008168
Lal1g0211 904 SMART sec14_4 480 648 IPR001251 -
Lal1g0211 904 PANTHER SEC14P-LIKE PHOSPHATIDYLINOSITOL TRANSFER FAMILY PROTEIN 356 675 - -
Lal1g0211 904 PANTHER SEC14P-LIKE PHOSPHATIDYLINOSITOL TRANSFER FAMILY PROTEIN 674 855 - -
Lal1g0211 904 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 480 651 IPR001251 -
Lal1g0211 904 Gene3D - 394 467 - -
Lal1g0211 904 Coils Coil 779 799 - -
Lal1g0211 904 Gene3D - 17 338 IPR042086 -
Lal1g0211 904 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 674 855 - -
Lal1g0211 904 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 356 675 - -
Lal1g0211 904 SMART CRAL_TRIO_N_2 435 460 IPR011074 -
Lal1g0211 904 Coils Coil 810 830 - -
Lal1g0211 904 SUPERFAMILY CRAL/TRIO domain 479 673 IPR036865 -
Lal1g0211 904 SUPERFAMILY CRAL/TRIO N-terminal domain 404 476 IPR036273 -
Lal1g0211 904 Pfam CRAL/TRIO domain 486 645 IPR001251 -
Lal1g0211 904 Gene3D - 468 677 IPR036865 -
Lal1g0211 904 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 14 339 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0211 Lal-Chr1 1265728 1273166 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0211 414 638 Acyl Lipid Metabolism Gene Families AT5G47730 27.778 1.98e-18 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0211 - - gmx:100798374 690.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0211 1 1265728 1273166 Lal9g0148 9 942729 946776 LSH