Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0144 ATGAGGATTACTTGGAGTAAGGGAAAGCTGTTGGAACTGAACGGAGGCAGCTTCTTCCTCATTGATTGTCTCTGCAACCCAACACAACGCGTCCCAGCACTGATGGAGGAGGGTAGATTTGCTGAAGAACTTTATGCGGAAAGTTTGCAAGTGTCAAAATTGGAACTTAGGCCGATTGCTGATGATCGAGAAAATTGTGATGGTGATGATTTGGGCCTTGATGGTTCTTCGTGGGATGCCTTTGATGACAAGTTGGATAACTCATCAGATTTGGACAGGGAGTGGCAGAGGAGACATGACCAATTCCATACAATTGGATATCGCGATGGTCTTATAGCAGGGAAGGAAGCTTCTGCACAGGAGGGGTTCAATATTGGTTTTAAACAATCAGTCCTTACTGGTTATAGCTGGGGTGTTGTGAGAGGTGTTACCAGTGCATTTGCTTATCTTCCAGACCAATTAAAAGAGAAGTTGGTTGAAACGATAGTAAAAAGAAATGAGTTTCAAGGGCTGTATGAATCAGTACATTCTTTGTCAACAACAGATGCCCTTAGATTGTTTAATGAAGATATTAAAGCAAAACAAGCTGTAGAGCAGAGTGAACATGTAGAGGTTAGCCCCCATACAGCAGGTTTGCTGGAGCAAACTTCGGATGGCTCTCTGGGAAATTATCTTGGACAACTTGAATCACTGATTCGTGATTCTCCTGCCATTGACATTCATTTTCCCAAACCGGAGAAGTACCTATATAAAAAGTTACAATTGGAAAGGCCTATCATTTATATAGCAAAGTTACAGTTGGAAAATTATGAAGAGTTCTGCAGAGTTTGGATCGATTGTAAAGGAGGAACCATGGACAAGGTTATTTCAGTATTAATACCTATGCCAGCGTATAAGATGAATCGGGAAAAGTTGATTAAGATGGCTGGTTCAGTTCGAACTGGTGGAAAGGGTACTGTGAGAAGAAAGAAGAAGGCTGTCCACAAGACAACAACTACAGATGACAAAAGGCTTCAGAGCACCCTCAAGAGAATAGGGGTGAACGCTATCCCCGCAATTGAGGAGGTCAACATCTTTAAGGATGATGTAGTTATCCAGTTTTTAAACCCCAAAGTTCAAGCTTCCATCGCTGCTAATACTTGGGTGGTTAGTGGTTCTCCTCAAACCAAGAAGTTGCAGGATATACTCCCTAGCATTATTCACCAATTAGGACCAGATAACTTGGAAAACCTGAAGAAGCTAGCGGAGCAGTTTCAGAAGCAAGCTCCTGAAGGAGGTGCTGGCGCAACCACCACACTAGAGGAGAAGGATGATGATGATGATGTCCCAGAACTTGTTCCTGGGGAGACTTTTGAGACAGCTGCTGAGGAGACCAAGGCAGCTTCTTAG 1389 0.432 MRITWSKGKLLELNGGSFFLIDCLCNPTQRVPALMEEGRFAEELYAESLQVSKLELRPIADDRENCDGDDLGLDGSSWDAFDDKLDNSSDLDREWQRRHDQFHTIGYRDGLIAGKEASAQEGFNIGFKQSVLTGYSWGVVRGVTSAFAYLPDQLKEKLVETIVKRNEFQGLYESVHSLSTTDALRLFNEDIKAKQAVEQSEHVEVSPHTAGLLEQTSDGSLGNYLGQLESLIRDSPAIDIHFPKPEKYLYKKLQLERPIIYIAKLQLENYEEFCRVWIDCKGGTMDKVISVLIPMPAYKMNREKLIKMAGSVRTGGKGTVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDVVIQFLNPKVQASIAANTWVVSGSPQTKKLQDILPSIIHQLGPDNLENLKKLAEQFQKQAPEGGAGATTTLEEKDDDDDVPELVPGETFETAAEETKAAS 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0144 462 ProSiteProfiles NAC A/B domain profile. 332 396 IPR002715 -
Lal9g0144 462 PANTHER NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT BETA 300 460 - -
Lal9g0144 462 Pfam Essential protein Yae1, N terminal 106 143 IPR019191 -
Lal9g0144 462 SMART NAC_2 335 390 IPR002715 -
Lal9g0144 462 PANTHER TRANSCRIPTION FACTOR BTF3 FAMILY MEMBER 300 460 IPR039370 -
Lal9g0144 462 MobiDBLite consensus disorder prediction 419 462 - -
Lal9g0144 462 Gene3D - 347 403 IPR038187 -
Lal9g0144 462 Pfam NAC domain 335 390 IPR002715 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0144 Lal-Chr9 920395 927322 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0144 K01527 - gmx:100814352 310.071
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0205 1 1226875 1229308 Lal9g0144 9 920395 927322 LSH
Lal2g0127 2 778578 781433 Lal9g0144 9 920395 927322 LSH