Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0205 ATGAATCGGGAAAAGTTGATTAAGATGGCCGGTTCAGTTCGAACAGGTGGAAAGGGTACCGTGAGAAGAAAGAAGAAGGCAGTCCACAAGACAACAACTACAGATGACAAAAGGCTCCAGAGCACCCTCAAAAGAATAGGGGTTAACGCTATCCCGGCAATTGAGGAAGTCAACATCTTTAAGGACGATGTTGTTATCCAGTTTCTCAACCCTAAAGTTCAAGCATCCATTGCTGCTAATACTTGGGTGGTTAGTGGGTCCCCACAGACCAAGAAGTTGCAAGATATACTCCCCAGCATTATTCACCAATTAGGACCAGATAACTTGGAAAACCTGAAGAAGTTGGCAGAGCAGTTCCAGAAGCAGGCTCCTGAAGCAGGTGCTGGTGCAACCACTGCGCCTGAGGAGAATGATGATGATGATGATGTCCCAGAGCTTGTTCCAGGGGAAACTTTTGAGACTGCTGCAGAGGAGACCAAGGCTTCTTCTTAG 492 0.4695 MNREKLIKMAGSVRTGGKGTVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDVVIQFLNPKVQASIAANTWVVSGSPQTKKLQDILPSIIHQLGPDNLENLKKLAEQFQKQAPEAGAGATTAPEENDDDDDVPELVPGETFETAAEETKASS 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0205 163 PANTHER NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT BETA 1 161 - -
Lal1g0205 163 SMART NAC_2 36 91 IPR002715 -
Lal1g0205 163 PANTHER TRANSCRIPTION FACTOR BTF3 FAMILY MEMBER 1 161 IPR039370 -
Lal1g0205 163 Pfam NAC domain 36 91 IPR002715 -
Lal1g0205 163 Gene3D - 48 104 IPR038187 -
Lal1g0205 163 ProSiteProfiles NAC A/B domain profile. 33 97 IPR002715 -
Lal1g0205 163 MobiDBLite consensus disorder prediction 118 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0205 Lal-Chr1 1226875 1229308 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0205 K01527 - gmx:100500153 250.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0205 1 1226875 1229308 Lal2g0127 2 778578 781433 LSH
Lal1g0205 1 1226875 1229308 Lal9g0144 9 920395 927322 LSH