Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0138 ATGGATGCTCTCAGAAAACAAGCCTCCAAGCTTCGTGAACAAGTCGCTCGTCAACAACAGGCTGTTTTTAAACAATTTGGTGGTGGAGTATATGGAGGTTCAGATAATGTGGTTACTGATGAGGTAGAACTCCATCTATATCAGAAACTCGAGAAACTTTACCTATCAACACGTGCTGCAAAGCATTATCAAAGGGATATTGTCCGTGGTGTAGAAGGTTTTATCGTTACCGGGTCCAAGCAAGTTGAAATAGGAACAAAGTTGTCAGAAGATAGCAGGAAGTATGGTTCAGAAAATACATGTACCAGTGGCAGTACATTGTGTAGAGCTGCACAAAGTTTTGCACGAGCTCGTGCTCAAATGGAGAAGGAACGTGGGAACTTACTAAAAGCTCTTGGCACGCAGGTTGCAGAGCCCTTAAGAGCAATGGTGGTGGGAGCTCCATTAGAGGATGCCCGGCATCTAGCCCAACGTTATGACCGGATACGACAGGAAGCTGAAGCTCAGGCTACTGAAGTCTTCAAACGTCATGCAAAAGTAAGAGAGACACCAGGCAATGCTGAGAATGCTATGAAATTAGAAGCAGCTGAAACAAAGCTGCAAGACCTGAAGAAAAACATGGCAATGTTAGGGAAAGAAGCGGCTGCAGCTTTGACTGCTGTTGAAGCACAGCAACAGAGGTTAACCCTTCAGCGTCTTATAGCTACGGTCGAAGCGGAGCGTGCCTATCATCAGATAGTCCTGCAAATACTTGATCAGCTTGAGGGAGAAATGATATCAGAAAGACAACGAATTGAAGCCCCACCCACTCCTAGTGTTGATGACAGCATGCCGCCACCCCCGTCATATGAAGAAGTGAATGGTGTCTATGCTTGTCAGACACACGACAGATCATCAGATAGCATGGGTTACTTCTTAGGAGAGATTTTATTTCCATACTCTGCCGTGTCTGAAGTGGAGCTGAATCTATCAGTTGGTGATTATGTTGTTGTTCGAAAGGTGACAAATAATGGATGGGCAGAAGGTGAATGCAAAGGGAAAGCAGGTTGGTTTCCATTTAGTTACATTGAAAGAAGGGAGCGGGTTCTTGCAAGCAAGGTGGCTCAGGTGTTATGA 1116 0.4525 MDALRKQASKLREQVARQQQAVFKQFGGGVYGGSDNVVTDEVELHLYQKLEKLYLSTRAAKHYQRDIVRGVEGFIVTGSKQVEIGTKLSEDSRKYGSENTCTSGSTLCRAAQSFARARAQMEKERGNLLKALGTQVAEPLRAMVVGAPLEDARHLAQRYDRIRQEAEAQATEVFKRHAKVRETPGNAENAMKLEAAETKLQDLKKNMAMLGKEAAAALTAVEAQQQRLTLQRLIATVEAERAYHQIVLQILDQLEGEMISERQRIEAPPTPSVDDSMPPPPSYEEVNGVYACQTHDRSSDSMGYFLGEILFPYSAVSEVELNLSVGDYVVVRKVTNNGWAEGECKGKAGWFPFSYIERRERVLASKVAQVL 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0138 371 ProSiteProfiles Src homology 3 (SH3) domain profile. 302 361 IPR001452 GO:0005515
Lal9g0138 371 Coils Coil 1 21 - -
Lal9g0138 371 Gene3D Arfaptin homology (AH) domain/BAR domain 46 267 IPR027267 -
Lal9g0138 371 Coils Coil 186 213 - -
Lal9g0138 371 PANTHER PROTEIN, PUTATIVE-RELATED 1 370 - -
Lal9g0138 371 SMART SH3_2 305 360 IPR001452 GO:0005515
Lal9g0138 371 SUPERFAMILY BAR/IMD domain-like 48 258 IPR027267 -
Lal9g0138 371 Coils Coil 220 240 - -
Lal9g0138 371 PANTHER SH3 DOMAIN-CONTAINING 1 370 - -
Lal9g0138 371 Pfam Variant SH3 domain 310 357 IPR001452 GO:0005515
Lal9g0138 371 SUPERFAMILY SH3-domain 268 359 IPR036028 GO:0005515
Lal9g0138 371 Coils Coil 149 169 - -
Lal9g0138 371 Gene3D SH3 Domains 293 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0138 Lal-Chr9 888745 898241 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0138 - - lang:109325985 627.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0138 9 888745 898241 Lal9g0138 9 888745 898241 ECH
Lal1g0196 1 1167770 1171994 Lal9g0138 9 888745 898241 LSH