Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0127 ATGGCCAAGAAACCTGGATCAAGGCTCAGTAAATTATCTGTGTACCTTTACATTCCTAATATCATAGGATACATCCGGGTTCTTTTAAACTGTACTGCTTTCTACCTATGTTTTACAAACAAAATATTGTTTTCTATTCTCTATTTTTTCAGCTTTGTATGTGATGCTGTGGATGGCTGGGCTGCTCGCAAATTCAATCAAGTGTCAACCTTTGGAGCTGTTCTGGACATGGTAACAGACAGAATTAGCACCGCTTGTCTACTTGTAGTTCTCTCGCAAGTGTACAGGCCTGGCCTGATTTTCTTGTCATTGCTGGCCTTAGATATTGCCAGCCATTGGCTACAAATGTATAGCACTTTCTTGCTGGGAAAGGCTAGTCATAAAGATGTAAAAGACAGCACTAACTGGCTTTTCAAGGCATATTATGGAAATAGGATATTTATGGCTTACTGTTGTGTCTCATGCGAGGTTCTTTATTTAATCATGTTTTATCTTGCGGAGAATCAAACAGAGAAATTGGTGTATGTTCTGAAAATTAATTTGCAAAAGATATCAATACTTTCTTTCCTCATTGCTACAAGTTTATTTGGATGGGCAATCAAGCAAGTTATAAATATTATTCAGATGAAAACAGCGGCAGATGTGTGTGTTCTTCATGACATTGACAAGAAACACAAGCAGTGA 684 0.3772 MAKKPGSRLSKLSVYLYIPNIIGYIRVLLNCTAFYLCFTNKILFSILYFFSFVCDAVDGWAARKFNQVSTFGAVLDMVTDRISTACLLVVLSQVYRPGLIFLSLLALDIASHWLQMYSTFLLGKASHKDVKDSTNWLFKAYYGNRIFMAYCCVSCEVLYLIMFYLAENQTEKLVYVLKINLQKISILSFLIATSLFGWAIKQVINIIQMKTAADVCVLHDIDKKHKQ 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0127 227 Pfam CDP-alcohol phosphatidyltransferase 17 143 IPR000462 GO:0008654|GO:0016020|GO:0016780
Lal9g0127 227 PIRSF CDP_diag_ino_3_P 1 227 IPR014387 -
Lal9g0127 227 ProSitePatterns CDP-alcohol phosphatidyltransferases signature. 58 80 IPR000462 GO:0008654|GO:0016020|GO:0016780
Lal9g0127 227 PANTHER CDP-DIACYLGLYCEROL--INOSITOL 3-PHOSPHATIDYLTRANSFERASE 1 6 226 - -
Lal9g0127 227 Gene3D - 4 210 IPR043130 -
Lal9g0127 227 PANTHER PHOSPHATIDYLINOSITOL SYNTHASE 6 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0127 Lal-Chr9 838045 842115 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0127 1 226 Lipid Metabolism Gene Families AT1G68000 75.664 2.58e-131 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0127 K00999 - gmx:100797963 395.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0127 9 838045 842115 Lal9g0127 9 838045 842115 ECH
Lal1g0171 1 1073981 1078371 Lal9g0127 9 838045 842115 LSH
Lal2g0103 2 646882 651069 Lal9g0127 9 838045 842115 LSH