Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0171 ATGGCCAAGAAACCTGGACCACGACCCAGTAAATTATCTGTGTACCTTTACATTCCTAATATCATAGGATACATTCGGGTTCTTTTAAACTGTACTGCCTTCTACCTATGTTTTTCAAACAAAATATTGTTCTCTATTCTCTATTTTTTCAGCTTTGTTTGTGATGCTGTGGATGGCTGGGCTGCTCGCAAATTCAATCAAGTGTCAACCTTTGGAGCTGTTCTGGACATGGTAACAGACAGAATTAGCACCGCTTGCCTACTTGTAGTTCTTTCGCAAGTGTACAGGCCTGGCCTGATTTTCTTGTCATTACTGGCCTTAGATATTGCCAGCCACTGGCTACAAATGTACAGCACTTTCTTGCTGGGAAAGGCTAGTCATAAAGATGTAAAAGACAGCACCAACTGGCTTTTCAAGGCATATTATGGAAATAGGATGTTTATGGCTTACTGCTGTGTCTCATGTGAGGTTCTTTACTTAATCCTGTTTTATCTTGCGGGGAATCAAACAGAGAAATTGGTAGATATTCTAACAATTAATTTGCAAAAGATGTCAATAATTTCCTTCCTCATTGCTACAAGTGTATTTGGATGGGCAATCAAGCAAGTTATAAATATAATTCAGATGAAGACAGCAGCAGATGTGTGTGTGCTTCATGACATTGACAAGAAACACAAGCAGTGA 684 0.3933 MAKKPGPRPSKLSVYLYIPNIIGYIRVLLNCTAFYLCFSNKILFSILYFFSFVCDAVDGWAARKFNQVSTFGAVLDMVTDRISTACLLVVLSQVYRPGLIFLSLLALDIASHWLQMYSTFLLGKASHKDVKDSTNWLFKAYYGNRMFMAYCCVSCEVLYLILFYLAGNQTEKLVDILTINLQKMSIISFLIATSVFGWAIKQVINIIQMKTAADVCVLHDIDKKHKQ 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0171 227 PANTHER PHOSPHATIDYLINOSITOL SYNTHASE 3 226 - -
Lal1g0171 227 Gene3D - 9 209 IPR043130 -
Lal1g0171 227 PIRSF CDP_diag_ino_3_P 1 227 IPR014387 -
Lal1g0171 227 ProSitePatterns CDP-alcohol phosphatidyltransferases signature. 58 80 IPR000462 GO:0008654|GO:0016020|GO:0016780
Lal1g0171 227 PANTHER CDP-DIACYLGLYCEROL--INOSITOL 3-PHOSPHATIDYLTRANSFERASE 1 3 226 - -
Lal1g0171 227 Pfam CDP-alcohol phosphatidyltransferase 17 142 IPR000462 GO:0008654|GO:0016020|GO:0016780
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0171 Lal-Chr1 1073981 1078371 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0171 1 226 Lipid Metabolism Gene Families AT1G68000 75.221 3.29e-133 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0171 K00999 - gmx:100797963 400.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0171 1 1073981 1078371 Lal1g0171 1 1073981 1078371 ECH
Lal1g0171 1 1073981 1078371 Lal2g0103 2 646882 651069 LSH
Lal1g0171 1 1073981 1078371 Lal9g0127 9 838045 842115 LSH