Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0121 ATGTTACCTCTCAAAGTGTTTGTTATTTTTATCACTGTTTCATTGGCCATTGCCAGCACCAAGGATATTGTTGAAGATAATAATAATAATAATAATGATGGTAAGATTAGCAATAATAAAAAGAAGACTGTGACTTATGATGGCAGATCACTCATTATCAATGGAAAACGAGAGCTTCTCTTCTCCGGTTCAATCCATTACACGCGAAGCACTCCTGAGATGTGGCCAGAGCTTCTTGACAAGGCAAGAAAAGGAGGTTTAAATGTGATCCAAACTTATGTGTTTTGGAATGCACACGAGACCGAGAAAGGCAAGTTCAACTTTGAAGGCCAGTATGATTTGGTGAAGTTCATTAAGCTCGTTCATGAGAAAGGGATGTATGTAACCCTCAGGGTTGGCCCTTTCATCCAAGCTGAATGGAATCATGGAGGGCTTCCATATTGGCTAAGAGATGTCCCAGATATCATATTCCGCTCTAACAATGGACCCTTTAAGAAACACATGAAAGACTATGTATCAGCCATAATAGGAAGGGTGAGAGAGGCGAATCTCTTTGCTCCCCAAGGAGGCCCCATCATCTTGGCACAGATTGAGAATGAGTACAATCATATCCAACTAGCTTATGACGCAGAAGGCGATAATTATGTCCAATGGGCCGCAAAATTGGCTGTGTCAATGGATATCGGAGTTCCATGGATTATGTGCAAGCAGACTGATGCTCCTGATCCAGTGATCAATGCATGCAATGGAAGGCATTGTGGTGATACCTTCACAGGCCCAAACAAACCATATAAGCCTTCCATATGGACTGAAAACTGGACAGCTCAGTACAGAGTATTTGGTGACCCACCATCCCAAAGATCAGCTGAAGACATTGCCTTCTCAATTGCTCGCTTCTTTTCTAAGAATGGATGTTTGGCTAACTATTATATGTACCATGGTGGAACAAATTTTGGTAGAACAAGCTCCGCATTTTCCACAACCCGTTATTACGATGAAGCTCCTCTTGATGAGTTTGGCCTTCAGAGAGAACCAAAATGGAGCCACTTGAGGGATGTGCACAAGGCTCTCAACCTATGTAAGAAGGCTTTACTCACAAGTCAATCCAGTGTCATAAAATTGAGCCAATTTCATGAGATTATAGTGTATGAGAAGCCAGGGAGTGATGTATGTTCTGCTTTCATCACTAACAACCACACAAAAACACCAGCAACTTTAAAATTCAGAGGTTTGGACTATTATTTGCCACCACGTTCTATTAGCATCCTTCCTGATTGCAAGACTGTGGTCTTCAACAGTCAAAATATTGTTTCACAACACAACTCAAGGAATTACAAGAAGTCAAAGGCTGCAAACGATAATCTTAAGTGGGAGGTGTTTTCTGAGTCCATTCCAACATTTAAACAATTGCCAGCCAAAGAAAAAAACCCTGCAGAACTTTATTCCATGCTTAAGGACACCACTGATTATGCATGGTACACTACTGGTGTTGAATTGGGTCCAGAAGACTTCCCAAAGAAGAATGAGATATCCCCCGTTCTTCGTATTATGAGTCTTGGCCATTCCATGCTTGTCTTTGTAAATGGAGAATACATAGGATCTGGTCATGGTAGCCATGAGGAGAAAACTTTTGAATTCCAGAAAACTGTAAAGTTCAATGTTGGAGTTAACCACATATCTATCTTGGCTGCCACTGTGGGACTTCCGGATAGTGGAGCATACATGGAACACAGGTATGCTGGACCAAAGTCTATAACCATCCTTGGTCTGAACTCTGGAACAGTTGATCTGACACATAATGGTTGGGGTAATCAGGTTGGTCTCCATGGTGAGAAGAATAGGATATTCAGTGAGGAGGGATCAAAGAAAGTACAATGGAAGGAAGCTAGAGGAAAGGGGAAAGCTCTTTCTTGGTACAAGAGAACATTTGGAACACCAGAGGGAAGGGGTCCTGTTGCCATAAAGATGCATGGTATGGGGAAAGGAATGATTTGGGTCAATGGTTTAAGCATTGGTCGACATTGGATGAGTTACCTCTCCCCTCTTGGACAACCTACTCAAGCAGACTACCACATCCCAAGAGCTTTCCTGAAAGAAAAAGAGAACTTGCTTGTTATATTGGAGGAGGAGGAAGCAAGTCCAGAAAACATTACAATCCTAAGAGTGGATAGAGACACAATATGCAGTTTCATTACAGAGAATCACCCACCGAATGTGAAGTCATGGGAAAGTAAGGGAATGAAACTCACAGCAGTTGTGGATAAACTGAGGCCAGAAGCTTACCTCAAGTGTCCAAACCACAAAACAATTGTGGGTGTAGAATTTGCAAGTTATGGTGATCCTGTAGGTTTCTGTGGAAGCTTTAGTTTGGGAAAATGTAATGCTCCTAACACCAAGCAGATTGTTGAGCAGCATTGTTTGGGAAAAGAATATTGTTCTGTTCCATTGGATAAACCAATCTTCATAAGGAATAATGAGGATGGTTGCCCAGGTTTCAAGTCACTTGCTATCCAAGTCTCATGTGCCACTCGCAACTCCAAAGAATAA 2547 0.4185 MLPLKVFVIFITVSLAIASTKDIVEDNNNNNNDGKISNNKKKTVTYDGRSLIINGKRELLFSGSIHYTRSTPEMWPELLDKARKGGLNVIQTYVFWNAHETEKGKFNFEGQYDLVKFIKLVHEKGMYVTLRVGPFIQAEWNHGGLPYWLRDVPDIIFRSNNGPFKKHMKDYVSAIIGRVREANLFAPQGGPIILAQIENEYNHIQLAYDAEGDNYVQWAAKLAVSMDIGVPWIMCKQTDAPDPVINACNGRHCGDTFTGPNKPYKPSIWTENWTAQYRVFGDPPSQRSAEDIAFSIARFFSKNGCLANYYMYHGGTNFGRTSSAFSTTRYYDEAPLDEFGLQREPKWSHLRDVHKALNLCKKALLTSQSSVIKLSQFHEIIVYEKPGSDVCSAFITNNHTKTPATLKFRGLDYYLPPRSISILPDCKTVVFNSQNIVSQHNSRNYKKSKAANDNLKWEVFSESIPTFKQLPAKEKNPAELYSMLKDTTDYAWYTTGVELGPEDFPKKNEISPVLRIMSLGHSMLVFVNGEYIGSGHGSHEEKTFEFQKTVKFNVGVNHISILAATVGLPDSGAYMEHRYAGPKSITILGLNSGTVDLTHNGWGNQVGLHGEKNRIFSEEGSKKVQWKEARGKGKALSWYKRTFGTPEGRGPVAIKMHGMGKGMIWVNGLSIGRHWMSYLSPLGQPTQADYHIPRAFLKEKENLLVILEEEEASPENITILRVDRDTICSFITENHPPNVKSWESKGMKLTAVVDKLRPEAYLKCPNHKTIVGVEFASYGDPVGFCGSFSLGKCNAPNTKQIVEQHCLGKEYCSVPLDKPIFIRNNEDGCPGFKSLAIQVSCATRNSKE 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0121 848 Pfam Beta-sandwich domain in beta galactosidase 364 436 IPR041392 -
Lal9g0121 848 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 189 201 IPR019801 GO:0004553|GO:0005975
Lal9g0121 848 Gene3D Glycosidases 40 360 - -
Lal9g0121 848 SUPERFAMILY (Trans)glycosidases 42 360 IPR017853 -
Lal9g0121 848 PANTHER GLYCOSIDE HYDROLASE FAMILY 35 PROTEIN 35 832 - -
Lal9g0121 848 PANTHER BETA-GALACTOSIDASE RELATED 35 832 IPR001944 GO:0004553|GO:0005975
Lal9g0121 848 Gene3D - 754 847 IPR043159 -
Lal9g0121 848 Gene3D - 425 581 - -
Lal9g0121 848 Gene3D - 608 730 - -
Lal9g0121 848 ProSiteProfiles SUEL-type lectin domain profile. 754 842 IPR000922 GO:0030246
Lal9g0121 848 PRINTS Glycosyl hydrolase family 35 signature 54 71 IPR001944 GO:0004553|GO:0005975
Lal9g0121 848 PRINTS Glycosyl hydrolase family 35 signature 75 93 IPR001944 GO:0004553|GO:0005975
Lal9g0121 848 PRINTS Glycosyl hydrolase family 35 signature 130 149 IPR001944 GO:0004553|GO:0005975
Lal9g0121 848 PRINTS Glycosyl hydrolase family 35 signature 187 202 IPR001944 GO:0004553|GO:0005975
Lal9g0121 848 PRINTS Glycosyl hydrolase family 35 signature 268 283 IPR001944 GO:0004553|GO:0005975
Lal9g0121 848 PRINTS Glycosyl hydrolase family 35 signature 305 320 IPR001944 GO:0004553|GO:0005975
Lal9g0121 848 PRINTS Glycosyl hydrolase family 35 signature 324 340 IPR001944 GO:0004553|GO:0005975
Lal9g0121 848 PRINTS Glycosyl hydrolase family 35 signature 634 648 IPR001944 GO:0004553|GO:0005975
Lal9g0121 848 PRINTS Glycosyl hydrolase family 35 signature 661 677 IPR001944 GO:0004553|GO:0005975
Lal9g0121 848 SUPERFAMILY Galactose-binding domain-like 599 745 IPR008979 -
Lal9g0121 848 Pfam Glycosyl hydrolases family 35 50 356 IPR031330 -
Lal9g0121 848 Pfam Galactose binding lectin domain 762 841 IPR000922 GO:0030246
Lal9g0121 848 SUPERFAMILY Galactose-binding domain-like 420 582 IPR008979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0121 Lal-Chr9 796140 801467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0121 44 842 Glycoside Hydrolase AT2G16730 60.474 0.0 1049
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0121 - - gmx:100780092 1325.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0121 9 796140 801467 Lal9g0121 9 796140 801467 ECH
Lal1g0166 1 1046420 1052725 Lal9g0121 9 796140 801467 LSH