Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0166 ATGTTACTTCTCAGATTTTTTGTCATTTTCATCATTCTTTCATTCGCCAATGTCATTGCCCAGGATATTGTTCAACAAAATAATAATAATAATGTCAAAAAGATTCATAATAATATAAATAAGACAGTGACTTATGATGGGAGGTCACTCATTATCAATGGAAAACATGAGCTTCTCTTCTCTGGTTCCATCCATTACACAAGAAGCACTCCAGAGATGTGGCCAGAGCTTCTTGACAAGGCAAGAAAGGGAGGTTTAAATGTGATCCAAACTTACGTGTTTTGGAATGCTCACGAGCCTGAGAAAGGCAAGTTCAACTTTGAAGGCCAATATGATTTAGTAAAATTCATTAAGCTTGTTCAAGCGAATGGAATGTATGTAACCCTCAGGGTTGGTCCTTTCATCCAAGCTGAATGGAATCACGGAGGACTTCCATATTGGCTAAGAGAGGTCCCAAATATTATATTTCGCTCTAACAATGAACCCTTTAAGAAACACATGAAAAAATACGTATCAGCCATAATAGGAAGGGTGAAAGAGGCGAACCTCTTCGCTCCACAAGGAGGCCCTATCATCTTGGCACAGATTGAGAATGAGTACAACCATATCCAACTTGCTTATGACGAGGAAGGACCTAATTATGTACAATGGGCCGCAAAATTGGCAGTTTCGATGGATACTGGAGTTCCATGGATTATGTGCAAGCAGACAGATGCTCCTGACCCAGTAATCAATGCATGCAATGGAAGGCACTGTGGTGATACCTTCGTAGGCCCAAACAAACCATACAAGCCTTCCATATGGACTGAAAACTGGACAGTTCAATACAGAGTATTTGGAGATCCACCTTCACAAAGATCTGTCGAAGACATTGCCTTTTCAATTGCTCGCTTCTTCTCTAAGAATGGAGCTTTGGCTAACTACTATATGTACCATGGTGGAACAAATTTTGGTAGAACAAGTTCAGCCTTTTCCACAACCCGCTATTATGATGAAGCTCCTCTTGATGAATTTGGTCTTCAGAGAGAACCAAAATGGAGTCACTTAAGGGATGTGCACAAGGCTCTCAGCCTAAGCAAGAAGGCTTTGCTCACAGGTCAATCTACTGTCACAAAAGTGAACCAATTTAATGAGATTATTGTGTATGAGAAACGTGAAAGTGATATATGTGCTGCTTTCCTCACTAACAACAATACCAATACGTCAGCGACATTAAAATTCAGAGGTGCAGACTATTATTTGCCACCACGTTCCATTAGCATCCTCCCTGATTGCAAGACTGTGGTCTTCAACACTCAAAATATTGTTTCACAGCATAATAAAAGACTCTACAAGAAGTCAAAGGTTGCAAACGACAACCTTAAGTGGGAGACATTTTCTGAAACCATTGCAACTACCAAAGAATTGCCAGCCAAAGATAAAACACCTGCAGAACTTTATTCCTTGCTTAAAGACACCACTGACTATGCATGGTACACCACGAGTGTCGAATTGGGTCCAGAAGACTTGCCAAAGAAGAATGAGGTATCCCCCGTTCTGCGTATTATGAGTCTTGGCCATTCAATGCTTGTCTTTGTAAATGGAGAATACATAGGATCTGGACATGGTAGCCATGAGGAGAAAACTTTTGAATTCCATAAAAGTGTAAATTTCAAGGTTGGAGTTAACCAGATATCAATGTTGGCTGCCACAGTGGGACTTCCAGACAGTGGAGCATACATGGAACACAGGTATGCTGGACCAAAATCTATAACCATCCTTAGTGAAAAAGGAGTAATTGATCTGACTCGTAATGCTTGGGGTTATGAGGTTGGTCTCCAAGGAGAGAAGAATAGAATTTTCACTGAGGAAGGATCAAAGAAAGTACAATGGAAGGATGTCAAGGGAAAAGGACAGGCTCTTTCCTGGTACAAGACAACATTCCAAACACCAGAGGGAAGGGATCCTGTTGCCATCAAGATGCATAGTATGGGGAAAGGAATGATTTGGGTCAATGGTCTAAGCATTGGTCGACATTGGATGAGTTACCTCTCTCCCCTTGGAGAGCCTACTCAATCCGACTACCACATACCAAGAGCTTTCCTCAAAGAAAAAGACAACTTTCTTGTTATATTGGAGGAGGAGGAAGCAAACCCAGAAAAGATTGTTATCCAAAGAGTGAATAGAGACACAATATGCAGTATCATAAGAGAGAATGACCCACCAAATGTGAAGTCATGGGCAAGTAAGGGCATGAAACTCACACCTGTTGTGGATAAACTGATACCAGAAGCATTCCTCAAGTGTCCAAACCACAAAACCATTGTGGCTGTTGAGTTTGCAAGCTATGGTGATCCTTCAGGTGTATGTGGAGCCTTTACTTTGGGAAAATGTAATGCACCTAACACCAAGCAGATTGTTGAGCAGCTATGCTTGGGAAAAGAAGCATGTTCAGTTCCAGTGGAGAAAACAATGTTGTTAAAAAATGGTGAGGATGGTTGCCCAGGTGTGGTGAAGGAACTAGCTATCCAAGTGTTATGTGGCACTGGTGTCTCTAAACAATGA 2544 0.4135 MLLLRFFVIFIILSFANVIAQDIVQQNNNNNVKKIHNNINKTVTYDGRSLIINGKHELLFSGSIHYTRSTPEMWPELLDKARKGGLNVIQTYVFWNAHEPEKGKFNFEGQYDLVKFIKLVQANGMYVTLRVGPFIQAEWNHGGLPYWLREVPNIIFRSNNEPFKKHMKKYVSAIIGRVKEANLFAPQGGPIILAQIENEYNHIQLAYDEEGPNYVQWAAKLAVSMDTGVPWIMCKQTDAPDPVINACNGRHCGDTFVGPNKPYKPSIWTENWTVQYRVFGDPPSQRSVEDIAFSIARFFSKNGALANYYMYHGGTNFGRTSSAFSTTRYYDEAPLDEFGLQREPKWSHLRDVHKALSLSKKALLTGQSTVTKVNQFNEIIVYEKRESDICAAFLTNNNTNTSATLKFRGADYYLPPRSISILPDCKTVVFNTQNIVSQHNKRLYKKSKVANDNLKWETFSETIATTKELPAKDKTPAELYSLLKDTTDYAWYTTSVELGPEDLPKKNEVSPVLRIMSLGHSMLVFVNGEYIGSGHGSHEEKTFEFHKSVNFKVGVNQISMLAATVGLPDSGAYMEHRYAGPKSITILSEKGVIDLTRNAWGYEVGLQGEKNRIFTEEGSKKVQWKDVKGKGQALSWYKTTFQTPEGRDPVAIKMHSMGKGMIWVNGLSIGRHWMSYLSPLGEPTQSDYHIPRAFLKEKDNFLVILEEEEANPEKIVIQRVNRDTICSIIRENDPPNVKSWASKGMKLTPVVDKLIPEAFLKCPNHKTIVAVEFASYGDPSGVCGAFTLGKCNAPNTKQIVEQLCLGKEACSVPVEKTMLLKNGEDGCPGVVKELAIQVLCGTGVSKQ 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0166 847 Pfam Galactose binding lectin domain 760 840 IPR000922 GO:0030246
Lal1g0166 847 Pfam Beta-sandwich domain in beta galactosidase 363 435 IPR041392 -
Lal1g0166 847 Gene3D - 437 578 - -
Lal1g0166 847 SUPERFAMILY Galactose-binding domain-like 597 743 IPR008979 -
Lal1g0166 847 SUPERFAMILY Galactose-binding domain-like 419 580 IPR008979 -
Lal1g0166 847 ProSiteProfiles SUEL-type lectin domain profile. 756 841 IPR000922 GO:0030246
Lal1g0166 847 PRINTS Glycosyl hydrolase family 35 signature 53 70 IPR001944 GO:0004553|GO:0005975
Lal1g0166 847 PRINTS Glycosyl hydrolase family 35 signature 74 92 IPR001944 GO:0004553|GO:0005975
Lal1g0166 847 PRINTS Glycosyl hydrolase family 35 signature 129 148 IPR001944 GO:0004553|GO:0005975
Lal1g0166 847 PRINTS Glycosyl hydrolase family 35 signature 186 201 IPR001944 GO:0004553|GO:0005975
Lal1g0166 847 PRINTS Glycosyl hydrolase family 35 signature 267 282 IPR001944 GO:0004553|GO:0005975
Lal1g0166 847 PRINTS Glycosyl hydrolase family 35 signature 304 319 IPR001944 GO:0004553|GO:0005975
Lal1g0166 847 PRINTS Glycosyl hydrolase family 35 signature 323 339 IPR001944 GO:0004553|GO:0005975
Lal1g0166 847 PRINTS Glycosyl hydrolase family 35 signature 632 646 IPR001944 GO:0004553|GO:0005975
Lal1g0166 847 PRINTS Glycosyl hydrolase family 35 signature 659 675 IPR001944 GO:0004553|GO:0005975
Lal1g0166 847 PANTHER BETA-GALACTOSIDASE RELATED 34 837 IPR001944 GO:0004553|GO:0005975
Lal1g0166 847 SUPERFAMILY (Trans)glycosidases 41 358 IPR017853 -
Lal1g0166 847 PANTHER GLYCOSIDE HYDROLASE FAMILY 35 PROTEIN 34 837 - -
Lal1g0166 847 Gene3D - 602 732 - -
Lal1g0166 847 Gene3D - 756 846 IPR043159 -
Lal1g0166 847 Gene3D Glycosidases 38 360 - -
Lal1g0166 847 Pfam Glycosyl hydrolases family 35 49 355 IPR031330 -
Lal1g0166 847 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 188 200 IPR019801 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0166 Lal-Chr1 1046420 1052725 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0166 43 841 Glycoside Hydrolase AT2G16730 60.349 0.0 1039
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0166 - - gmx:102663614 1275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0166 1 1046420 1052725 Lal1g0166 1 1046420 1052725 ECH
Lal1g0166 1 1046420 1052725 Lal9g0121 9 796140 801467 LSH