Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0120 ATGGAAACTCGGAGTCGGAAGCGGGCGGAGGCTTCCTCAGCTGCCCCTTCATCCTCCTCTTCTGGTCCCACCACCCGTTCAAGCAAAAGCCCTCGTTTTTCTTCTTCTTCAACCACCACTCCCACTCGCTCCGTCAACACTCGTTCCCGCGCATCCAGGACTAAGGAACCCTTGCCGCTTAAAAAATCTATTGCAATGGACTCCACCAATGAATCTTCTGGCTCGCGTGGTCGACGCGGGAAGAACACCAATAAGGATAATTCTGACAAGGGAAAGGAGAAGGAACATGATGTGAGGATCAGAGAAGCTGAGAGGGGGATTGGGTTGAACATGGAGAATAGTGGCATTGGGGATGACAATGATAATGATAGTGAAGGCGGTATTGGGATGTTGCATCCGAATCTGACGTCAGCGAGTAGTGCTCTTCAAGGGCTTCTTCGGAAGCTAGGTGCTGGTTTGGATGATCTGCTTCCTTCCTCTGCAATGGGTTCTGCATCGGCTTCGCATCAGAGTGGGAGACTGAAGAAGATCCTATCTGGATTGAGGGCTGACGGAGAGGAAGGTCGCCAGGTCGAGGCATTGACTCAGCTTTGTGAAATGCTTTCGATTGGGACCGAGGAATCACTTAGTACTTTCTCGGTTGATTCATTTGTTCCCGTACTTGTGGGGTTGTTGAATCATGAGATTAATCCTGATATCATGCTTCTTGCGGCTAGGGCACTTACTCATTTGTGTGATGTGCTGCCTTCGTCATGTGCTGCTGTTGTGCATTATGGTGCTGTGTCAATTTTCTGCGCAAGACTGCTTACAATTGAGTATATGGACTTAGCTGAGCAGTCTCTTCAAGCTCTAAAGAAGATATCTCAGGAGCACCCGACTGCCTGCTTACGAGCTGGTGCTCTAATGGCTGTGCTTTCTTATCTGGATTTCTTCTCAACTGGAGTTCAGAGGGTGGCATTGTCTACTGCTGCAAATATGTGCAAAAAGCTTCCTTCAGATGCAGCTGATTTTGTGATGGAAGCGGTTCCTCTTTTGACAAACCTCCTTCAATACCATGATTCAAAGGTATTGGAGCATGCTTCTGTTTGTTTGACTCGAATAGCTGAAGCATTTGCATCATCTCCAGACAAATTAGATGAATTGTGCAACCATGGACTAGTAACACAAGCTGCCTCTCTCATTTCTACCAGCAGTTCTGGTGGTGGACAGGCTTCTCTCAGCACATCAACATATACTGGTCTTATCCGGCTTCTTTCAACTTGCGCAAGTGGGTCCCCTCTTGGAGCTAAAACTTTGCTTCTCTTGGGAATTAGTGGCATTCTTAAAGATACTCTCTCTGATTCTGGAGTTTCTTCTAATTCCTCTGTCTCTCCTGCATTGAGCAGGCCACCAGATCAGATATTTGAGATTGTGAACCTGGCAAATGAGCTTCTGCCTCCATTGCCACAAGGAATAATTTCCCTTCCTGTCAGCTTGAACTTGTTTGTGAAAGGGCCCCTTGTAAAAAAGTCTCATGCTGGCAGTTCTGGGAAACAGGAGGAGACAAATGGAAATGTTACTGAGATATCGGCTCATGAGAAGCTATTAAATGATCAGCCTGAGCTGCTTCAGCAATTTGAGATGGATCTCCTTCCAGTTTTGATACAGATATACGGTTCTAGTGTCAATGGTCCAGTTCGGCACAAATGTCTGTCTGTCATTGGAAAATTGATGTATTTCAGCACTGCAGATATGATCCAGACTTTATTGAGTGTAACTAATATGTCAAGTTTCTTAGCTGGTGTCTTAGCATGGAAAGATCCACATGTTTTACTTCCTGCTTTGCAAATTGCTGAAATTCTTATGGAAAAGCTTCCTGGGACATTCAGGAAAATGTTTATCAGAGAGGGTGTTGTCCATGCGGTGGACCAACTTATTTTGGCTGGAAACCCAACAAATGTCTCTACCCAAGCATCTTTTGCTGAGAAAGACAATGATTCTGTATCTGGACCATCATCTCGTTCTCGGCGTTATCGGCGACGCAGCGGTAACTCCAATCCAGATGGAAATCCTTTGGATGATTCGAAGAGTCCAGTTTCAGTAAATGTTTGTTCGCCACCAAGCTCTGTGGATATTACAACACCAAATTCTAGTATCCGGTTATCGGTTAGCGCAGCTGCTAGAGCTTTTAAAGATAAGTACTTTCCATCTGATCCTGGGGCTATTGAAGTTGGTGTTACTGATGATCTTTTGCACCTGAAAAATCTTTGCATGAAGTTAAATGCTAGTGTTGATGACCAAAGGACGAATGGAAAAGGGAAATCTAAAACTTCTGAAGTTCTTCTGAAAGAGAATTCTGCTAACAAAGAAGAGTATTTAATTGGGGTGATATTTGACATGCTGAAGGAACTTGGCAAAGGAGATGGTGTATCCACTTTTGAATTTATTGGTAGTGGTGTTGTTGCAGCTTTGCTGAATTATTTTTCTTGTGGTTGTTTCTCTGAAGATCGAATATCCGAAACCAACTTGCCCAAGCTTCGCAAACAAGCACTTACAAGGTTTAAGTCATTTATAGCTGTTGCACTACCTGCCAGTACTGGCAATGAGGCCATGGCTCCTATGTCTGTCCTAGTCCAAAAGCTTCAAAGTGCTTTGTCCTCCTTGGAGTGTTTCCCTGTTGTGCTCAGTCATTCAGCTAGGTCATCTAGTGGAAGTGCACGACTCTCATCTGGACTAAGTGCATTATCACATCCCATCAAGTTGCGTCTCTGTCGAGCCCAGGGTGAAAAGTCACTTCGGGATTATTCATCCAACATTGTATTAATTGACCCATTAGCAAGTTTAGCAGCCATTGAGGAATTTCTTTGGCGCCGTATCCAGCGTAGTGAATCTTCCCAAAAGTCAACTGTACCTGTGGGGAATTCTGAATCTGGGACAACTGCTGGAACGGGTGTTTCATCTCCTTCCACTTCTGCCCCTTCAACTACTCGTCGCCATTCTACTAGATCCAGATCACCTGTTAATATAGGTGATACACCCAAAAAAGAAATTACTCAAGATAAGAGCATGAGCTCATCCAAGGGAAAGGGAAAAGCTCTATTAAAGCCTTCCCAGGAAGAGATAAGAGGTCCTCAAACCAGGAATGCTGTACGTAGAAGAGCAGCCCTTGACAAAGATGCTCAAATGAAGCCTCTAAATGGCGACTCTACATCTGAGGATGAAGATTTGGATATATCTCCTGTTGAGATTGATGAGGCATTGATGATTGATGATGATGATGATATTTCGGATGATGAAGACGATGACCATGAAGATGACCTGGGGGATGTTTCTCTCCCTGTTTGCCTGCCTGACAAAGTACATGATGTGAAATTGGGTGACTCTGCTGAGAGCACTGTTGCTCCTGCGACAAGTGATGGCCATACTAATGCAGCCTCAGGCTCTAGTAGCAAAGTTGGTACAGCCAGGGGATCAGACAATGCTGAGTTTAGGAGTGGCTATTCTTCTACCTCAAGGGGTGCATTGTCATTTGCTGCTGCTGCTATGGCTGGACTAGGGTCTGTTAATAGCAGAGGTATTCGGGGTGGCAGAGATAGGCACGGACGTCCATTGTTTGGTGGTTCTAATGGTCCTCCTAAGTTGATCTTCACTGCTGGAGGGAAGCAGCTTAATAGGCATTTGACTATATATCAGGCAATTCAGAGACAGCTTGTGGTAGATGAAGATGATGAAGAGAGGTTTGCTGGCAGTGACTTTGTATTTAGTGATGGAAGCAGGTTGTGGGGAGATATTTATACTATAACTTATCAGAGGTCTGAGAATCAAACGAACAGAGCTTCTGCTGGAGGTTCAAGTTTAAATGTTTCAAAATCTGCGCCTGCATCAAGTTCTAATTCTGAAGCCAAGCTGCATCAAACTTCCGTTCTTGATAGCATCTTGCAGGGAGAATTGCCCTGTGAACTGGAGAAATCTATTCCTACATACAACATATTGGCACTGTTGCGTGTACTGGAGGGTTTGAACCAGCTAGCACCTCGTTTAAGGGCCCAGGTGGTTACTGATAGCTTTGCTGTTGGAAATACTTCGGATTTAGATGAGCTAGGTGTCACCGGTGGTGCTCGGGTTCCTCCTGAGGAATTCATCAGCAGCAAGCTCACTCCAAAATTAGCTAGGCAAATGCAAGATGCCCTAGCATTATGCAGTGGGAGTCTCCCCTCGTGGTGTTACCAGTTAACTAAAGCATGCCCTTTTTTGTTTCCTTTTGAGATCCGGCGACAGTACTTCTATTCAACTGCCTTTGGGTTATCTCGTGCACTGCATCGACTGCAGCAGCAACAAGGTGCAGATGGTCATGGATCACTAAATGAAAGAGAGTTGAGGGTTGGGAGGTTACAGCGCCAGAAGGTTCGTGTTTCTCGTAATCATATTTTGGATTCTGCTGCTAAAGTGATGGAGATGTATTCTAGCCAAAAGGCTGTACTTGAAGTAGAATATTTTGGTGAAGTTGGCACTGGCCTCGGTCCCACACTTGAGTTTTATACACTTTTAAGTCACGACTTGCAAAAAGTTGGACTACAAATGTGGAGATCGGATTCTTCAGAGAAATATCAAATGGAAATTGATGGAAATGAAAAGAAAAGTAAAAGCGTTGAAAGCTCTTTTGCTGGAGATGGGGAACTTGTTCAGTCACGTCTTGGGTTATTTCCTCGTCCTTGGCCTGCAAATTCTGATGCATCAGAGGGCAGCCAGTTTTATAAAGTGATTGAGTATTTCCGGTTGGTAGGCCGTGTAGTTGCTAAAGCTCTTCAAGATGGACGTTTATTGGATTTGCCATTGTCAGTGGCATTTTATAAGCTTGTTCTTAGTCAAGAGCTTGATTTGTATGACATTCTTGTTATTGACGCTGAGCTTGGGAAAACTTTGCAAGAGTTGAACGCCCTTGTTTGCCGGAAAAGTTTTTTAGAATCTGGTGGCAGCTACACTGACAAAATTGCTAATTTACATTTTCGTGGCGCCCCAATTGAAGATCTCTTCTTGGATTTTACACTTCCTGGTTATCCAGAATACATTTTGAAACCGGGAAGTGAAATTGTTAACATCAATAATTTGGAGGAATACGTATCCGCGGTGGTTGATGCAACTGTCAAGACTGGAATTATGCGTCAAATAGAAGCATTTAGAGCAGGATTCAATCAGGTTTTTGACATTTCAACTCTACAAGTTTTTACTCCCCAAGAACTGGACTATTTGCTTTGTGGTCGTAGAGAGATGTGGAAGGCTGAGACACTAGTCGACCATATAAAGTTTGACCATGGGTACACTGCCAAGAGCCCTGCTATAGTTAACTTACTTGAAATAATGGGAGAGTTCACACCTGAGCAGCAGCGTTCCTTCTGTCAATTTGTTACTGGTGCACCTAGGTTGCCACCTGGTGGATTGGCTGTTCTAAATCCAAAACTAACGATCGTGAGGAAGCTTTCATCAACCGCAGCTAATGTTTCATCTAATGGGAATGGACCTTCTGAATCAGCCGATGATGACTTGCCAAGTGTGATGACATGTGCTAATTACCTGAAGCTTCCTCCTTACTCCACCAAGGAAATTATGTACAAGAAGCTACTCTATGCAATCAGTGAAGGCCAGGGATCCTTCGATTTATCATGA 5643 0.4428 METRSRKRAEASSAAPSSSSSGPTTRSSKSPRFSSSSTTTPTRSVNTRSRASRTKEPLPLKKSIAMDSTNESSGSRGRRGKNTNKDNSDKGKEKEHDVRIREAERGIGLNMENSGIGDDNDNDSEGGIGMLHPNLTSASSALQGLLRKLGAGLDDLLPSSAMGSASASHQSGRLKKILSGLRADGEEGRQVEALTQLCEMLSIGTEESLSTFSVDSFVPVLVGLLNHEINPDIMLLAARALTHLCDVLPSSCAAVVHYGAVSIFCARLLTIEYMDLAEQSLQALKKISQEHPTACLRAGALMAVLSYLDFFSTGVQRVALSTAANMCKKLPSDAADFVMEAVPLLTNLLQYHDSKVLEHASVCLTRIAEAFASSPDKLDELCNHGLVTQAASLISTSSSGGGQASLSTSTYTGLIRLLSTCASGSPLGAKTLLLLGISGILKDTLSDSGVSSNSSVSPALSRPPDQIFEIVNLANELLPPLPQGIISLPVSLNLFVKGPLVKKSHAGSSGKQEETNGNVTEISAHEKLLNDQPELLQQFEMDLLPVLIQIYGSSVNGPVRHKCLSVIGKLMYFSTADMIQTLLSVTNMSSFLAGVLAWKDPHVLLPALQIAEILMEKLPGTFRKMFIREGVVHAVDQLILAGNPTNVSTQASFAEKDNDSVSGPSSRSRRYRRRSGNSNPDGNPLDDSKSPVSVNVCSPPSSVDITTPNSSIRLSVSAAARAFKDKYFPSDPGAIEVGVTDDLLHLKNLCMKLNASVDDQRTNGKGKSKTSEVLLKENSANKEEYLIGVIFDMLKELGKGDGVSTFEFIGSGVVAALLNYFSCGCFSEDRISETNLPKLRKQALTRFKSFIAVALPASTGNEAMAPMSVLVQKLQSALSSLECFPVVLSHSARSSSGSARLSSGLSALSHPIKLRLCRAQGEKSLRDYSSNIVLIDPLASLAAIEEFLWRRIQRSESSQKSTVPVGNSESGTTAGTGVSSPSTSAPSTTRRHSTRSRSPVNIGDTPKKEITQDKSMSSSKGKGKALLKPSQEEIRGPQTRNAVRRRAALDKDAQMKPLNGDSTSEDEDLDISPVEIDEALMIDDDDDISDDEDDDHEDDLGDVSLPVCLPDKVHDVKLGDSAESTVAPATSDGHTNAASGSSSKVGTARGSDNAEFRSGYSSTSRGALSFAAAAMAGLGSVNSRGIRGGRDRHGRPLFGGSNGPPKLIFTAGGKQLNRHLTIYQAIQRQLVVDEDDEERFAGSDFVFSDGSRLWGDIYTITYQRSENQTNRASAGGSSLNVSKSAPASSSNSEAKLHQTSVLDSILQGELPCELEKSIPTYNILALLRVLEGLNQLAPRLRAQVVTDSFAVGNTSDLDELGVTGGARVPPEEFISSKLTPKLARQMQDALALCSGSLPSWCYQLTKACPFLFPFEIRRQYFYSTAFGLSRALHRLQQQQGADGHGSLNERELRVGRLQRQKVRVSRNHILDSAAKVMEMYSSQKAVLEVEYFGEVGTGLGPTLEFYTLLSHDLQKVGLQMWRSDSSEKYQMEIDGNEKKSKSVESSFAGDGELVQSRLGLFPRPWPANSDASEGSQFYKVIEYFRLVGRVVAKALQDGRLLDLPLSVAFYKLVLSQELDLYDILVIDAELGKTLQELNALVCRKSFLESGGSYTDKIANLHFRGAPIEDLFLDFTLPGYPEYILKPGSEIVNINNLEEYVSAVVDATVKTGIMRQIEAFRAGFNQVFDISTLQVFTPQELDYLLCGRREMWKAETLVDHIKFDHGYTAKSPAIVNLLEIMGEFTPEQQRSFCQFVTGAPRLPPGGLAVLNPKLTIVRKLSSTAANVSSNGNGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLLYAISEGQGSFDLS 1880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0120 1880 MobiDBLite consensus disorder prediction 1038 1052 - -
Lal9g0120 1880 MobiDBLite consensus disorder prediction 1268 1295 - -
Lal9g0120 1880 MobiDBLite consensus disorder prediction 78 100 - -
Lal9g0120 1880 MobiDBLite consensus disorder prediction 1181 1202 - -
Lal9g0120 1880 MobiDBLite consensus disorder prediction 955 1107 - -
Lal9g0120 1880 SMART arm_5 288 328 IPR000225 GO:0005515
Lal9g0120 1880 SMART arm_5 331 369 IPR000225 GO:0005515
Lal9g0120 1880 SMART arm_5 205 246 IPR000225 GO:0005515
Lal9g0120 1880 MobiDBLite consensus disorder prediction 1064 1100 - -
Lal9g0120 1880 CDD HECTc 1460 1875 IPR000569 GO:0004842
Lal9g0120 1880 SMART hect_3 1471 1880 IPR000569 GO:0004842
Lal9g0120 1880 MobiDBLite consensus disorder prediction 677 703 - -
Lal9g0120 1880 MobiDBLite consensus disorder prediction 10 53 - -
Lal9g0120 1880 MobiDBLite consensus disorder prediction 1 100 - -
Lal9g0120 1880 MobiDBLite consensus disorder prediction 1123 1158 - -
Lal9g0120 1880 MobiDBLite consensus disorder prediction 1124 1158 - -
Lal9g0120 1880 PANTHER HECT E3 UBIQUITIN LIGASE-RELATED 54 1880 - -
Lal9g0120 1880 SUPERFAMILY ARM repeat 173 642 IPR016024 -
Lal9g0120 1880 Pfam HECT-domain (ubiquitin-transferase) 1508 1880 IPR000569 GO:0004842
Lal9g0120 1880 SUPERFAMILY Hect, E3 ligase catalytic domain 1453 1873 IPR035983 GO:0004842
Lal9g0120 1880 Gene3D Hect, E3 ligase catalytic domain 1751 1878 - -
Lal9g0120 1880 Gene3D - 175 653 IPR011989 -
Lal9g0120 1880 MobiDBLite consensus disorder prediction 955 1001 - -
Lal9g0120 1880 MobiDBLite consensus disorder prediction 650 665 - -
Lal9g0120 1880 PANTHER E3 UBIQUITIN-PROTEIN LIGASE TRIP12 54 1880 IPR045322 GO:0006511|GO:0061630
Lal9g0120 1880 ProSiteProfiles HECT domain profile. 1581 1880 IPR000569 GO:0004842
Lal9g0120 1880 Gene3D Hect, E3 ligase catalytic domains 1400 1643 - -
Lal9g0120 1880 MobiDBLite consensus disorder prediction 650 703 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0120 Lal-Chr9 784730 795721 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0120 K10590 - gmx:100783336 2912.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0120 9 784730 795721 Lal9g0120 9 784730 795721 ECH
Lal1g0160 1 1021452 1032494 Lal9g0120 9 784730 795721 LSH
Lal2g0099 2 622895 632154 Lal9g0120 9 784730 795721 LSH