Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0116 ATGGCGATGGCTTTCAAAATGGCTACTATTGGGATGTGGGTTACGGATGAATGCAAGAACTCTTTCATGGAGATGAAGTGGAAGAAGGTGCACAAATACGTTGTGTACAAGATCGATGAAAAATCCAGACTTGTGACCGTTGATAAGGTGGGTGGTCCTGGTGAAGGTTATGATGACCTTGCTGCTTCCTTGCCCAAAGATGATTGTAGATATGCTGTTTTCGACTTTGATTTTGTCAGTGTTGATAATTGCCGCAAGAGCAAGATCTTCTTCATTTATTGGTCACCAACTGCATCAAGGATAAGAGCGAAGTTTCTATACGCAACATCAAAGGATGGGCTAAGAAGAGCTCTGGATGGAATACACTATGAAGTCCAAGCCACAGATCTAACTGAGATGGGGTTCGATATAATTCAAGAAAGAGCCAAATAA 432 0.419 MAMAFKMATIGMWVTDECKNSFMEMKWKKVHKYVVYKIDEKSRLVTVDKVGGPGEGYDDLAASLPKDDCRYAVFDFDFVSVDNCRKSKIFFIYWSPTASRIRAKFLYATSKDGLRRALDGIHYEVQATDLTEMGFDIIQERAK 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0116 143 Gene3D Severin 2 143 IPR029006 -
Lal9g0116 143 Pfam Cofilin/tropomyosin-type actin-binding protein 18 140 IPR002108 GO:0003779
Lal9g0116 143 SUPERFAMILY Actin depolymerizing proteins 6 141 - -
Lal9g0116 143 CDD ADF_cofilin_like 11 142 IPR017904 GO:0015629|GO:0030042
Lal9g0116 143 ProSiteProfiles ADF-H domain profile. 11 143 IPR002108 GO:0003779
Lal9g0116 143 SMART adf_2 16 143 IPR002108 GO:0003779
Lal9g0116 143 PANTHER COFILIN-RELATED 5 143 IPR017904 GO:0015629|GO:0030042
Lal9g0116 143 PANTHER ACTIN DEPOLYMERIZING FACTOR 5-RELATED 5 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0116 Lal-Chr9 763272 764456 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0116 K05765 - pvy:116129213 265.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0116 9 763272 764456 Lal9g0116 9 763272 764456 ECH
Lal1g0153 1 983524 984851 Lal9g0116 9 763272 764456 LSH