Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0153 ATGGTATTTTCAATGCGCCCCTATCTATATATAAAAATCCAAATCCCCCATTCTTTCAATATTAAGAAGAAAAAGGTTAAGACCACTTTGGTTCAATTCTCCTCCTCACCTAACAACAATGGCGATGGCTTTCAAAATGGTACTGTTACACTACTTCAATATAACTATAAGTTTTATGCTACTACTGGTATGTGGGTTACGGATGAGTGTAAGAATTCATTCATGGAGATGAAGTGGAAGAAGGTTCACAAATATGTTGTGTACAAGATCGATGAAAGGTCAAGACTTGTGACCGTTGATAAGGTGGGTGGTCCTGATGAGGGTTATGATGACCTTGCTGCTTCCTTACCCAATGATGATTGTAGATATGCTGTCTTCGACTTTGATTTTGTCACTGTTGATAATTGCCATAAGAGCAAGATCTTCTTCATTTATTGGTCTCCAACAGCATCAAGGATAAGAGCAAAGATTCTATACGCAACATCAAAAGATGGGTTGAGAAGAGCTCTTGATGGAATCCACTATGAAGTTCAGGCCACTGATCCAACTGAGATGGGATTTGATATAATTCAAGACAGAGCAAAATAA 588 0.381 MVFSMRPYLYIKIQIPHSFNIKKKKVKTTLVQFSSSPNNNGDGFQNGTVTLLQYNYKFYATTGMWVTDECKNSFMEMKWKKVHKYVVYKIDERSRLVTVDKVGGPDEGYDDLAASLPNDDCRYAVFDFDFVTVDNCHKSKIFFIYWSPTASRIRAKILYATSKDGLRRALDGIHYEVQATDPTEMGFDIIQDRAK 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0153 195 CDD ADF_cofilin_like 62 194 IPR017904 GO:0015629|GO:0030042
Lal1g0153 195 Gene3D Severin 60 195 IPR029006 -
Lal1g0153 195 ProSiteProfiles ADF-H domain profile. 63 195 IPR002108 GO:0003779
Lal1g0153 195 SUPERFAMILY Actin depolymerizing proteins 57 193 - -
Lal1g0153 195 PANTHER ACTIN DEPOLYMERIZING FACTOR 5-RELATED 39 195 - -
Lal1g0153 195 SMART adf_2 68 195 IPR002108 GO:0003779
Lal1g0153 195 PANTHER COFILIN-RELATED 39 195 IPR017904 GO:0015629|GO:0030042
Lal1g0153 195 Pfam Cofilin/tropomyosin-type actin-binding protein 70 192 IPR002108 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0153 Lal-Chr1 983524 984851 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0153 K05765 - pvy:116129213 256.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0153 1 983524 984851 Lal1g0153 1 983524 984851 ECH
Lal1g0153 1 983524 984851 Lal9g0116 9 763272 764456 LSH