Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0079 ATGCAGAGGTTTAGGACACATCATATGCTTGCCCCTTTCACACCTGGGGGGAAGACTAATCCTTTTATTATAGACAAGTCAGAGGGATGCTATGTATATGACATCAATGGGAAGAAATATCTTGACGCACTTTCTGGCCTGTGGTGTCTTAGTTTAGGAGGAAGTGAGTCTCGCCTTATTGAAGCAGCCACTGCACAATTAAAGAAGTTGCCATTTTACCATTCCTTTTTTAACAAGACTACTGAACCTTCTTTGGTTCTAGCCAAGGATCTCATACAAATGTTCACAGCTAGAAAAATGGAGAAAGCATTTTTTGTTAATAGTGGATCAGAAGCCAATGACACTGTGGTCAGACTTGTATGGTATTACAACAATGCATTGGGACGACCAAAGAAGAAAAAGTTTATAGCTCGTGATGAATCGTATCATGGTTCAACAATGATAGCAGCTAGTCTTACTGGCATTCCAGCTTTACATGAAAAGTTTGATCTCCCATTTCCATTTGTCTTACACACTGACTGTCCACATTATTGGCGGTATCATCTTCCAGGCGAAACAGAAGAAGAGTTTTCAACAAGGTTAGCAAACAATCTGGAGGAGATGATTCTAAAAGAGGGACCAGATACAATTGCAGCATTTATTGCTGAACCCTTAATGGCAGCTGGTGGTCTAATACCTCCACCTGCAACTTATTTTGAAAAGATCCAAGTTGTTCTCAAGAAATATGACATTCTTTTTATTGCTGATGAGGTAATATGTGGCTTTGGAAGACTTGGGACAATGTTTGGGTGTGACAAGTATAACATCAAGCCAGATCTTGTTACCTTAGCTAAGGCACTTTCTTCTGGATATTTGCCAATTGGAGCCGTTCTTGTGAGCCCAGAAATTTCACAAGTTATAGACTCACAAAGCCAAGAAATTGGTGGATTTTTTCACGGCTTTACTTATTCTGGACATCCTGTACCATGTGCTGTTACAATTGAAACACTCAAGATCTACAGGGAAATAAATATTGTGGACAAAATTAGCAAAATTTCGTCAAAGTTCCAAGATGGCATAAGAGCATTTTCTGAGAGTCCTATAATTGGAGAGTTACTCAGCATTTTTGGGAAAGCACTAAAAGCTACAGAAGAGAGGGTGCAAAAAAGGTCTAAACTGAAGTCAAAGCTGTGA 1173 0.3939 MQRFRTHHMLAPFTPGGKTNPFIIDKSEGCYVYDINGKKYLDALSGLWCLSLGGSESRLIEAATAQLKKLPFYHSFFNKTTEPSLVLAKDLIQMFTARKMEKAFFVNSGSEANDTVVRLVWYYNNALGRPKKKKFIARDESYHGSTMIAASLTGIPALHEKFDLPFPFVLHTDCPHYWRYHLPGETEEEFSTRLANNLEEMILKEGPDTIAAFIAEPLMAAGGLIPPPATYFEKIQVVLKKYDILFIADEVICGFGRLGTMFGCDKYNIKPDLVTLAKALSSGYLPIGAVLVSPEISQVIDSQSQEIGGFFHGFTYSGHPVPCAVTIETLKIYREINIVDKISKISSKFQDGIRAFSESPIIGELLSIFGKALKATEERVQKRSKLKSKL 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0079 390 Pfam Aminotransferase class-III 20 362 IPR005814 GO:0008483|GO:0030170
Lal9g0079 390 Gene3D - 56 338 IPR015421 GO:0003824
Lal9g0079 390 PANTHER ADENOSYLMETHIONINE-8-AMINO-7-OXONONANOATE AMINOTRANSFERASE 3 365 - -
Lal9g0079 390 Gene3D Aspartate Aminotransferase, domain 1 22 365 IPR015422 GO:0003824
Lal9g0079 390 SUPERFAMILY PLP-dependent transferases 8 365 IPR015424 -
Lal9g0079 390 ProSitePatterns Aminotransferases class-III pyridoxal-phosphate attachment site. 246 283 IPR005814 GO:0008483|GO:0030170
Lal9g0079 390 CDD OAT_like 7 364 IPR005814 GO:0008483|GO:0030170
Lal9g0079 390 PANTHER GAMMA AMINOBUTYRATE TRANSAMINASE 1, MITOCHONDRIAL 3 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0079 Lal-Chr9 505040 510681 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0079 K16871 - gmx:100815181 597.816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0079 9 505040 510681 Lal9g0079 9 505040 510681 ECH
Lal1g0096 1 662523 670345 Lal9g0079 9 505040 510681 LSH