Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0096 ATGAATAAGCTTCTTCGATCCACACTCAGAACACAGGCTGCTGCAGTTTTCAGAAATTCTCAGGAAAATCTTCTTCAGGTCCCATTATGTACCAGATCATATAATGCAGAATCTTCTTTGGAAAAAGACATTTCAACAGCTGATTTGAAAACTAGTGAAAGGTTCAGGAGCCATGGTATGCTTGCCCCTTTCACAGCTGGGTGGCAGACTACAGATCTGAATCCTTTGGTTATAGACAAGTCAGAGGGGAGCTATGTATATGACATTAATGGGAGGAAATACCTTGACTCACTTGCTGGTCTATGGTGCACTGCTTTAGGAGGAAATGAGCCACGCCTTGTTGAAGCTGCCATTACACAATTAAAGAAGTTGCCATTTTACCATTCCTTCTGGAACCGGACCACCAAACCTTCTTTGGATCTAGCCAAGGATCTGCTGAAAACTTTCACAGCCAGAAAAATGGCAAAAGTTTTTTTTGTTAATAGTGGATCAGAAGCCAATGATAGTCAGGTGAAACTTGTATGGTATTATAACAATGCACTTGGACGACCAAATAAGAAGAAGTTTATAGCACGTGCTAAATCGTACCATGGTTCAACTTTGATAGCAGCTAGTCTTTCCGGCCTTCCAGCTTTACATCAAAAGTTTGATCTGCCTGCTCCATTTGTCTTGCACACTGACTGCCCACATTACTGGCGGTATCATCTTCCAGGCGAGACAGAGGAAGAGTTTTCAACAAGATTAGCCAACAATTTGGAGGAGCTGATTCTGAAAGAGGGACCGGATACAATTGCTGCATTTATTGCTGAACCCGTGATGGGGGCAGGTGGTGTGATAACTCCACCTTCAACTTACTTCGAGAAGATCCAAGCCGTTGTTAAGAAGTATGACATTCTGTTTATTGCGGATGAGGTAATCTGTGCCTTTGGAAGGCTTGGGACAATGTATGGATGTGACAAGTACAACATCAAGCCAGACCTTGTCTCTGTAGCTAAGGCACTTTCTTCTGGATATTTGCCAATTGGAGCAGTTCTTGTGAGCCCAGAAGTTTCAGAAGTTATACACTCACAAAGCAGCAAACTTGGTTCATTTTCCCATGGGTTTACTTATTCTGGACATCCCGTATCCTGTGCCGTTGCAATTGAAACTCTCAAGATTTACAAGTGTGTTCCTTTGGAAAGAAATATTTTGGACACCGTGAGGAAAATTTCCCCAAAGTTCCAAGATGGCATAAAAGCATTTTCCGACTCTCCTATCATCGGAGAGATACGAGGAACCGGCTTGATTCTGGGGACTGAGTTTACAGACAACAAGTCACCAAATGATCCATTCCCTCCTGAATGGGGCAATTTATACGATGGATTGGATGGTCTACATCTTGCCACCAACTGGATAGGCGCCTATTTTGGAGCACAATGCGAGAAGCATGGGATGTTAGTTCGCGTGGCTGGAGATAACATCATGATGTGTCCACCATTTATTATTTCCCCAGAAGAAATTGATGAGTTAATCAGCATTTATGGGAAGGCACTAAAAGCTACAGAAGAGAGGGTGAAGGAGCTCAAGTCCTCAAGTCTCAGCAGAAGTAGTAACTGA 1596 0.4305 MNKLLRSTLRTQAAAVFRNSQENLLQVPLCTRSYNAESSLEKDISTADLKTSERFRSHGMLAPFTAGWQTTDLNPLVIDKSEGSYVYDINGRKYLDSLAGLWCTALGGNEPRLVEAAITQLKKLPFYHSFWNRTTKPSLDLAKDLLKTFTARKMAKVFFVNSGSEANDSQVKLVWYYNNALGRPNKKKFIARAKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYHLPGETEEEFSTRLANNLEELILKEGPDTIAAFIAEPVMGAGGVITPPSTYFEKIQAVVKKYDILFIADEVICAFGRLGTMYGCDKYNIKPDLVSVAKALSSGYLPIGAVLVSPEVSEVIHSQSSKLGSFSHGFTYSGHPVSCAVAIETLKIYKCVPLERNILDTVRKISPKFQDGIKAFSDSPIIGEIRGTGLILGTEFTDNKSPNDPFPPEWGNLYDGLDGLHLATNWIGAYFGAQCEKHGMLVRVAGDNIMMCPPFIISPEEIDELISIYGKALKATEERVKELKSSSLSRSSN 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0096 531 ProSitePatterns Aminotransferases class-III pyridoxal-phosphate attachment site. 300 337 IPR005814 GO:0008483|GO:0030170
Lal1g0096 531 CDD OAT_like 70 511 IPR005814 GO:0008483|GO:0030170
Lal1g0096 531 Gene3D - 110 396 IPR015421 GO:0003824
Lal1g0096 531 PANTHER ADENOSYLMETHIONINE-8-AMINO-7-OXONONANOATE AMINOTRANSFERASE 19 521 - -
Lal1g0096 531 Pfam Aminotransferase class-III 75 510 IPR005814 GO:0008483|GO:0030170
Lal1g0096 531 PANTHER GAMMA AMINOBUTYRATE TRANSAMINASE 1, MITOCHONDRIAL 19 521 - -
Lal1g0096 531 SUPERFAMILY PLP-dependent transferases 59 512 IPR015424 -
Lal1g0096 531 Gene3D Aspartate Aminotransferase, domain 1 76 511 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0096 Lal-Chr1 662523 670345 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0096 K16871 - gmx:100792355 858.211
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0096 1 662523 670345 Lal9g0079 9 505040 510681 LSH