Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g1567 ATGGAGTCTCGTAGATACTTCTTCTCAGCACTTTTCTCTTTCTTTCTTCTTTCTTTCATTCTCCTTATCTTCCTTCCATCTCCTTTATCTCAACTCATCACACTCGCTACTAACAACAATGCTCAATACTCCATTAACCTCCATAGTCCTCTTAGGACTATGTTTTCCAACCACAATCAACAACTCCTCGCTGTTAATGAATATTCCACCGCCACTCACCGGAACAAATCAAGACACCGAATACCAACGCTACGGAAAGTTCAAGAAGAACTAGCAGGAGCAAGAGCTTCAATCAGAACCAATCGGACTTTCGGAACTGCCACACATGCAGGCGGCGATCAAGGCTATGTACCTGCCGGAGCTGTGTATCGTAATCCCCGTTTATTTTACAGGAGCTACTTGGAGATGGAGAAAATATTGAAAGTATATGTATATGAAGATGGGGATCATCCAATAGCTCATGATGGGCCATGCAAAGACATATACTCAATTGAAGGAAGGTTCCTACATGAAATAGAACATGGTGATGGAAGGTTTAGGACCAATGATCCTAATGAAGCTCATGTTTACTTCTTACCTTTAAGTGTGGCTTGGATGGTGAAATATCTCTATACACCACTTTCTTATAACCACTCACCCTTAAGGCAATTTGTATCTGATTATGTGAGACTCATATCTACTAAGTACCCTTTCTGGAATAGAACTCATGGTGCCGACCACTTCATGCTTGCTTGTCATGATTGGGGTCCAAGTACATCAAAGGGAAACCCTTTTCTCTACAACACCTCCATCCGTGTCTTGTGCAATGCCAACACTTCAGAGGGCTTCAAACCTCAAAAAGATGTTTCTTTACCTGAAATCCATCTTTTAGGAGGTGAAGTTTCTTCTAAACTCCTTTCTCCCCAAAAAGACTATAATACCCCTCGTCGACACCTTGCTTTTTTCGCCGGAGGTGCACATGGCCCAATTAGGCCCAAACTCTTCCAATATTGGAAAAACCGTGGCGACAACGATAATGGTAATGGTAATGGTAATGATAATGATATTCGTGTTTACGAGTATCTCCCGAAAGACCTAGACTACTATTCCTTCATGCTAAACTCCAAGTTCTGCCTTTGTCCAAGTGGCTATGAAGTGGCTAGCCCAAGAATAGTGGAATCAATTTATGCTGAATGTGTTCCTGTCATATTATCTAACAATTATGTGTTGCCCTTTAGTGATGTATTACAATGGGATGCATTTTCCATTAAGGTGGATATTTCAGATATTCCAAGGCTAAAAGAGATTCTTAGTGCAATTCCAGAGGATGAATATTTAAGGCTGAAGAAAGGTGTAATGGCTGTGAGAAGACATTTTACACTGAATCAGCCAGTTAAGAGATTTGATGTCTTTCACATGATCTTACACTCTATATGGCTTAGAAGATTAAATATACCAGTCAGATAA 1446 0.4053 MESRRYFFSALFSFFLLSFILLIFLPSPLSQLITLATNNNAQYSINLHSPLRTMFSNHNQQLLAVNEYSTATHRNKSRHRIPTLRKVQEELAGARASIRTNRTFGTATHAGGDQGYVPAGAVYRNPRLFYRSYLEMEKILKVYVYEDGDHPIAHDGPCKDIYSIEGRFLHEIEHGDGRFRTNDPNEAHVYFLPLSVAWMVKYLYTPLSYNHSPLRQFVSDYVRLISTKYPFWNRTHGADHFMLACHDWGPSTSKGNPFLYNTSIRVLCNANTSEGFKPQKDVSLPEIHLLGGEVSSKLLSPQKDYNTPRRHLAFFAGGAHGPIRPKLFQYWKNRGDNDNGNGNGNDNDIRVYEYLPKDLDYYSFMLNSKFCLCPSGYEVASPRIVESIYAECVPVILSNNYVLPFSDVLQWDAFSIKVDISDIPRLKEILSAIPEDEYLRLKKGVMAVRRHFTLNQPVKRFDVFHMILHSIWLRRLNIPVR 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g1567 481 Pfam Exostosin family 138 432 IPR040911 -
Lal8g1567 481 PANTHER XYLOGALACTURONAN BETA-1,3-XYLOSYLTRANSFERASE 57 478 - -
Lal8g1567 481 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 57 478 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g1567 Lal-Chr8 20002406 20006839 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g1567 - - gmx:100820065 649.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g1567 8 20002406 20006839 Lal17g0222 17 1385141 1386581 PCT
Lal17g0222 17 1385141 1386581 Lal8g1567 8 20002406 20006839 PCT