Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0222 ATGATAGTTTCTATGGGGTTAATGACTGTTTTTTTCTCTCCTCATAATAGGAGCTACTTTGAGATGGAGAAAATATTCAAGGTATATGTATACCCAGAAGGGGACATACCAATTGTTCACGATGGCCCATGCAAGGACATATACTCGATCGAAGGGAGGTTCATCAATGAGATGGAAAACGGGAAAGGGAAATTTAGGACCACCGACCCTAATGCAGCTCACGTTTACTTTTTACCATTCAGTATAACGTGGATGGTCAAGTACCTATATACACCATTCTCTTATGACGTCACACCTTTAAAAACCTTTGTGTCTGATTATGTGAAATTGGTGTCTACGAGGTACCCCTTTTGGAATAGAACTCATGGTGCTGATCATTTCATGCTTGCTTGTCATGATTGGGGTCCTGATGCATCAAAAGGACACCCCTTTCTCTACAACACCTCCATAAGGGTCTTGTGCAATGCCAACACTTCAGAAGGCTTCAATCCTAGAAAGGATGTATCTTTACCAGAGATCCACCTTTTTGGAGGTGAAATATCCCCAAAACTCCTTTCACTCCCACCGGAAAACACTCCGCGCCGCAACCTTGCCTTCTTTGCCGGTGGCATGCATGGACCAATCCGCCCCATCCTCTTCCGCCATTGGAAAAACATAGACAATGATATCCGAGTCTATGAATACCTCCCAAAAGACTTAGACTACTATTCGTTGATGATCAACTCCAAGTTCTGTCTTTGTCCAAGTGGGCATGAAGTGGCTAGCCCAAGAATTGTAGAGTCAATTTATGCAGAGTGCGTGCCTGTGATTCTATCAAAGGGTTATGTTTTGCCTTTCAGTGATGTGCTGAGGTGGGAGGCATTTTCAGTGCAGGTGAATGTTTCTGATATCCCCAGGTTGAAAGAGGTGCTTAGTGCAATTCCAGTAGAAAACTATCGGAAGCTGAAGCAAGGAGTAAGGGCTGTGAGGAAACATTTTACTCTGAATCAACCAGCTAAGAAATATGATGTTTTTCACATGATCTTACACTCTATATGGCTAAGAAGATTAAATATAGAACTTGAATAG 1068 0.4251 MIVSMGLMTVFFSPHNRSYFEMEKIFKVYVYPEGDIPIVHDGPCKDIYSIEGRFINEMENGKGKFRTTDPNAAHVYFLPFSITWMVKYLYTPFSYDVTPLKTFVSDYVKLVSTRYPFWNRTHGADHFMLACHDWGPDASKGHPFLYNTSIRVLCNANTSEGFNPRKDVSLPEIHLFGGEISPKLLSLPPENTPRRNLAFFAGGMHGPIRPILFRHWKNIDNDIRVYEYLPKDLDYYSLMINSKFCLCPSGHEVASPRIVESIYAECVPVILSKGYVLPFSDVLRWEAFSVQVNVSDIPRLKEVLSAIPVENYRKLKQGVRAVRKHFTLNQPAKKYDVFHMILHSIWLRRLNIELE 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0222 355 PANTHER EXOSTOSIN FAMILY PROTEIN 16 353 - -
Lal17g0222 355 Pfam Exostosin family 24 306 IPR040911 -
Lal17g0222 355 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 16 353 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0222 Lal-Chr17 1385141 1386581 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0222 - - mtr:MTR_3g106690 620.928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0222 17 1385141 1386581 Lal17g0222 17 1385141 1386581 ECH
Lal8g1567 8 20002406 20006839 Lal17g0222 17 1385141 1386581 PCT
Lal17g0222 17 1385141 1386581 Lal8g1567 8 20002406 20006839 PCT