Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g1554 ATGGATTCTTGCAAAGAACAAGAAAATGTTGAAGCAACGAAGTGTGTTGTGTGGGTTCATGGCCCTATAATTGTAGGTGCTGGACCTTCAGGTATTGCTGTTGCTGCTTGTCTCAAAGAACAAGGAATACCAAGTGTTGTTCTTGAGAGAAGTGATTGCATAGCTTCATTATGGCAAAACAAAACCTATGACCGTCTCAAACTACACCTTCCTAAACACTTTTGTGAACTTCCATTAATGCCCTTTCCTAAGAATTTTCCAAAATACCCTTCTAAGTACCAGTTCATTTCCTACATGGAGTCCTATGCTTCACACTTCAATGTTGTTCCAAGGTTTAACCAAAGTGTTGAAAGTGCTGAGTTTGACCCAAGTTCTGAAATTTGGGTTGTTAGGAGTCAAGATTTTGTGTATATTTCACCTTGGATTGTTGTGGCTACAGGTGAGAATGCTGAACCTGTTATTCCTAATATTCCTGGCATGGACTTGTTTCATGGTTCTATAGTTCATACCAGTGTGTATAAGTCTGGTTCTGAATATAAAAACAAGAAAGTTTTGGTTATTGGTTGTGGTAATTCTGGAATGGAAGTTAGCTTAGACCTTTCTAGGCACAATGCCATTTCCTACATGGTTGCAAGAAATACTGTACATGTTATTCCTAGGGAGATATTTGGGTTCTCAACATTTGGAATAGCTATGGCACTCAATAAATGGTTTCCTTTAAAATTAGTAGACAAGTTTCTTTTGGTTGTGTCTAGTTTCATGTTGGGTAACACCAATCACTATGGTATCAAGAGACCCAAAACTGGACCCATTGAGCTCAAACTTGCAACTGGAAAAACCCCTGTCCTTGATGTTGGTCAACTGGCAAAAATTAAATCCGGTCACATTAAGGTGATGGAAGGTGTGAAGGAGATAACAAGAAATGGAGCAAAATTTGTGGATGGACAAGAAAAGGAATTTGATGATATAATATTAGCAACAGGGTACAAGAGCAACGTGCCTACTTGGCTCAAGAGTTGTGAGTTTTTTGACAAAGATGGAATGCCGAAAATGCCCTTCCCTCATGGATGGAAAGGAGAGAAAGGATTGTATACAGTGGGATTCACAAAAAGAGGTCTTCATGGAACTTCTTCTGATGCAGTTAACATTGCTAAAGATATAGCTCATAAATGGATGACTATTAAGGACAAGTCTTATTGCAATTCACATATTGTTCTTCTTAAGAATTCATAG 1233 0.3828 MDSCKEQENVEATKCVVWVHGPIIVGAGPSGIAVAACLKEQGIPSVVLERSDCIASLWQNKTYDRLKLHLPKHFCELPLMPFPKNFPKYPSKYQFISYMESYASHFNVVPRFNQSVESAEFDPSSEIWVVRSQDFVYISPWIVVATGENAEPVIPNIPGMDLFHGSIVHTSVYKSGSEYKNKKVLVIGCGNSGMEVSLDLSRHNAISYMVARNTVHVIPREIFGFSTFGIAMALNKWFPLKLVDKFLLVVSSFMLGNTNHYGIKRPKTGPIELKLATGKTPVLDVGQLAKIKSGHIKVMEGVKEITRNGAKFVDGQEKEFDDIILATGYKSNVPTWLKSCEFFDKDGMPKMPFPHGWKGEKGLYTVGFTKRGLHGTSSDAVNIAKDIAHKWMTIKDKSYCNSHIVLLKNS 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g1554 410 SUPERFAMILY FAD/NAD(P)-binding domain 23 221 IPR036188 -
Lal8g1554 410 Pfam Flavin-binding monooxygenase-like 24 335 IPR020946 GO:0004499|GO:0050660|GO:0050661
Lal8g1554 410 PRINTS FAD-dependent pyridine nucleotide reductase signature 22 41 - -
Lal8g1554 410 PRINTS FAD-dependent pyridine nucleotide reductase signature 183 201 - -
Lal8g1554 410 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA1-RELATED 12 406 - -
Lal8g1554 410 Gene3D - 21 393 IPR036188 -
Lal8g1554 410 PRINTS Pyridine nucleotide disulphide reductase class-II signature 21 43 - -
Lal8g1554 410 PRINTS Pyridine nucleotide disulphide reductase class-II signature 140 148 - -
Lal8g1554 410 PRINTS Pyridine nucleotide disulphide reductase class-II signature 179 203 - -
Lal8g1554 410 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 12 406 - -
Lal8g1554 410 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 171 349 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g1554 Lal-Chr8 19870136 19873440 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g1554 K11816 - gmx:100789347 662.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g1554 8 19870136 19873440 Lal10g0011 10 113060 115316 LSH