Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0011 ATGGGTTCTTGCAAAGAACAAGAAAAGGTTGAAGCAGCAAAGTGTGTGTGGATTCATGGCCCTATCATTGTAGGTGCTGGACCTTCAGGTATAGCAGTTGCTGCTTGTCTCAAGGAACAAGGAATACCAAGTGTGGTTCTTGAGAGAAGTGATTGCATAGCTTCATTGTGGCAAAACAAAACCTATGATCGTCTCAAACTACACCTTCCTAAGCACTTTTGTGAACTCCCCCTTATGCCCTTCCCTCTTAATTTCCCAAAATACCCCTCCAAGTACCAGTTTATTTCCTACATGGAGTCCTATGCATCACACTTCAACATTGTCCCAAGGTTCAACCAAACTGTTGAGAGTGCTGAGTTTGACCCATCTTCTAAAATTTGGGTTGTTAGGACCCAAGATTTTGAGTACATTTCACCTTGGATTGTTGTGGCCACAGGTGAGAATGCTGAGCCTGTTATTCCCAACATTCATGGGATGGACTTGTTTCATGGACCCATTATTCACACTAGTGTCTATAAATCTGGTTTTGATTATAAGAACAAGAAGGTTTTGGTTATTGGTTGTGGTAATTCTGGAATGGAAGTTAGCTTGGACCTTTGTAGGCATAATGCTATTTCTCACGTGGTTGCAAGAAATACAGTACATGTTATTCCTAGGGAGATGTTTGGGTTCTCAACATTTGGAATAGCTATGGCACTCAATAAATGGTTTCCTATAAAATTAGTAGACAAGTTCCTTTTGCTGGTGTCTACTTTCATGTTAGGCAATACCAATCACTATGGAATCAAGAGACCCAAAACTGGACCCATTGAACTCAAACTTGCAACTGGGAAAACACCTGTTCTTGATGTTGGTCAACTAGCACAAATTAAATCCGGTAACATTAAGGTAATGGAAGGAGTGAAGGAGATAACAAGAAATGGAGCGAAATTTGTGGATGGACAGGAAAAGGAATTTGATGCTATAATCTTGGCAACTGGATACAAGAGCAATGTGCCTACTTGGCTCAAGAGGTGTGAGTTTTTTGACAAAGATGGAATGCCGAAAATAGCCTTTCCTGATGGTTGGAAAGGAGAGGAAGGATTGTATACAGTGGGGTTCACAAGAAGGGGTCTTAATGGAACATCTTCTGATGCCTTCAACATTGCTAAAGATATAGCTCAGAAGTGGAACACTATTAACAACAATAACTCTTGCAATTCACATATTCTTCTCAATAATAATAATTAA 1230 0.4 MGSCKEQEKVEAAKCVWIHGPIIVGAGPSGIAVAACLKEQGIPSVVLERSDCIASLWQNKTYDRLKLHLPKHFCELPLMPFPLNFPKYPSKYQFISYMESYASHFNIVPRFNQTVESAEFDPSSKIWVVRTQDFEYISPWIVVATGENAEPVIPNIHGMDLFHGPIIHTSVYKSGFDYKNKKVLVIGCGNSGMEVSLDLCRHNAISHVVARNTVHVIPREMFGFSTFGIAMALNKWFPIKLVDKFLLLVSTFMLGNTNHYGIKRPKTGPIELKLATGKTPVLDVGQLAQIKSGNIKVMEGVKEITRNGAKFVDGQEKEFDAIILATGYKSNVPTWLKRCEFFDKDGMPKIAFPDGWKGEEGLYTVGFTRRGLNGTSSDAFNIAKDIAQKWNTINNNNSCNSHILLNNNN 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0011 409 SUPERFAMILY FAD/NAD(P)-binding domain 22 220 IPR036188 -
Lal10g0011 409 PRINTS FAD-dependent pyridine nucleotide reductase signature 21 40 - -
Lal10g0011 409 PRINTS FAD-dependent pyridine nucleotide reductase signature 182 200 - -
Lal10g0011 409 Pfam Flavin-binding monooxygenase-like 23 333 IPR020946 GO:0004499|GO:0050660|GO:0050661
Lal10g0011 409 Gene3D - 21 393 IPR036188 -
Lal10g0011 409 PRINTS Pyridine nucleotide disulphide reductase class-II signature 20 42 - -
Lal10g0011 409 PRINTS Pyridine nucleotide disulphide reductase class-II signature 139 147 - -
Lal10g0011 409 PRINTS Pyridine nucleotide disulphide reductase class-II signature 178 202 - -
Lal10g0011 409 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA1-RELATED 11 401 - -
Lal10g0011 409 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 169 348 IPR036291 -
Lal10g0011 409 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 11 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0011 Lal-Chr10 113060 115316 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0011 K11816 - gmx:100789347 646.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0011 10 113060 115316 Lal10g0011 10 113060 115316 ECH
Lal8g1554 8 19870136 19873440 Lal10g0011 10 113060 115316 LSH