Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g1553 ATGGAGAATTACAACAACCAAATGAAGGTCCTAGCAGAAAAACTAAGACACATGATCTTAAACTTTTTGGGCATGAATTCAGAAGAAGAAAAGAAATGGGTTAGTTCAAAAAACCAATTTGGAGTTATTCAACTAAACTACTACCCATGTTGTCCTGAACCAGATAGAGCCATGGGTTTAGCCCCACACACAGACTCATCATTTTTCACAATCATTCACCAAACACAAACCAATGGCCTTCAAATATTCAAAGAATGTTTAGGGTGGGTCCCTATAAACCCTGACCCTAACACACTTGTTGTTATAATTGGTGATATTCTTCATATCATGTCCAATGCAAGGTTTCATTGTGCACTTCATCGTGCTATAGTGAACAACACAAAAGAGAGATATTCAATGGCTTATTTTTATGCTCCACCACCTGATTATGTCATTTCCCCTTTGGTTTTTAACTCTGATGTGCCATGTTTTCATGCTTTGACTGTGAAGAACTATATCAACATTAAAGCCAAGAATTTTGGAGGAGCATTGTCTTTGATTACCACTACTTGA 552 0.3696 MENYNNQMKVLAEKLRHMILNFLGMNSEEEKKWVSSKNQFGVIQLNYYPCCPEPDRAMGLAPHTDSSFFTIIHQTQTNGLQIFKECLGWVPINPDPNTLVVIIGDILHIMSNARFHCALHRAIVNNTKERYSMAYFYAPPPDYVISPLVFNSDVPCFHALTVKNYINIKAKNFGGALSLITTT 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g1553 183 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 39 139 IPR005123 -
Lal8g1553 183 Coils Coil 1 21 - -
Lal8g1553 183 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 1 176 - -
Lal8g1553 183 SUPERFAMILY Clavaminate synthase-like 1 174 - -
Lal8g1553 183 Pfam 2OG-Fe(II) oxygenase superfamily 43 139 IPR044861 -
Lal8g1553 183 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 1 176 - -
Lal8g1553 183 Gene3D - 1 173 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g1553 Lal-Chr8 19861312 19861863 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g1553 1 138 Glycosyltransferase AT5G59530 34.058 8.06e-22 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g1553 K04124 - gmx:100780857 254.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g1553 8 19861312 19861863 Lal25g1074 25 14054090 14056618 LSH