Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g1074 ATGGCCACTACTCTCTCTGAAGCCTATAGAAACAACCCTCTCCATCTTCATCATATAATTCCCTTAGACTTTTCTTCAATTAGGACCTTACCTGATTCTCATGCTTGGTCTCAATCTAATGATACTGATAATATATTTTCATATAATGAATCATTATCAATACCCATTATTGACCTTATGGATCCTTATGCAATGGAACAAATAGGCCTTGCATGTGAGAAATGGGGTGCTTTTCAATTGATGAATCATGGCATACCCTTGAGTGTTATTGAAGAAGTTGAAGTAGAATCAAAGCAACTCTTTTCTCTTCCGGCTGAGCAGAAGTTGAAAGCACTTCGATCTCCCGGCGGCGCCACCGGGTACGGCAGAGCTAGGATATCACCATTTTTTCCTAAGTATATGTGGCATGAAGGATTCACCTTCATGGGTTCTTCTGATGATGCCAAAAAGATCTGGCCTAAGGACTATGAACCCTTTTGTGATGCAATGAAGAATTACCAAAACCAAATGAAGGTCCTAGCAGAAAAACTAACACACATGATATTAAACTTTTTGGGTATGAATAATTCATCATCAAAAGAAGAAAACAAAAAATGGGTTGGTTCAATAAACAACATTGGAGTTATTCAACTAAATTTCTACCCATGTTGTCCTGAACCAAATAGAGCCATGGGTCTAGCCCCACACACAGACACATCATTTCTCACAATCCTTCACCAAACCCTAACCAATGGACTTCAAATATTCAAAGATGGTTCAGGGTGGGTCCCTATAAACCCTGACCCTAACACACTTGTTGTTAACATTGGTGATATTCTTCATATAATGTCTAATGCTAGGTTTCATTGTGCACTTCATAGAGTTATAGTGAACAAAACAAAACAAAGATACTCTATGGCTTATTTTTATGGACCCCCAATTGATTATGTTATTTCACCTTTGGTTATAAATTCTCTTATTGTTCCACGTTTTCATGCTTTGAGTGTGAAGGATTATATCAACATTAAAGCCAAAAATCTTGGGGGAGCATTGTCTTTGATTACCATTACTTGA 1053 0.3751 MATTLSEAYRNNPLHLHHIIPLDFSSIRTLPDSHAWSQSNDTDNIFSYNESLSIPIIDLMDPYAMEQIGLACEKWGAFQLMNHGIPLSVIEEVEVESKQLFSLPAEQKLKALRSPGGATGYGRARISPFFPKYMWHEGFTFMGSSDDAKKIWPKDYEPFCDAMKNYQNQMKVLAEKLTHMILNFLGMNNSSSKEENKKWVGSINNIGVIQLNFYPCCPEPNRAMGLAPHTDTSFLTILHQTLTNGLQIFKDGSGWVPINPDPNTLVVNIGDILHIMSNARFHCALHRVIVNKTKQRYSMAYFYGPPIDYVISPLVINSLIVPRFHALSVKDYINIKAKNLGGALSLITIT 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g1074 350 Pfam 2OG-Fe(II) oxygenase superfamily 208 305 IPR044861 -
Lal25g1074 350 Pfam non-haem dioxygenase in morphine synthesis N-terminal 54 153 IPR026992 -
Lal25g1074 350 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 12 343 - -
Lal25g1074 350 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 205 305 IPR005123 -
Lal25g1074 350 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 12 343 - -
Lal25g1074 350 SUPERFAMILY Clavaminate synthase-like 17 339 - -
Lal25g1074 350 Gene3D - 17 340 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g1074 Lal-Chr25 14054090 14056618 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g1074 52 307 Glycosyltransferase AT5G59530 31.111 1.39e-31 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g1074 K04124 - gmx:100808546 515.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g1074 25 14054090 14056618 Lal25g1074 25 14054090 14056618 ECH
Lal8g1553 8 19861312 19861863 Lal25g1074 25 14054090 14056618 LSH