Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g1531 ATGAAGAAAGAACTTGCATGGCCACAATTCATAAGAAATCTTCTGATCATGGTGGTTGGGTCAAGAAACCGATCAAAATTAAGGGGGCCAACTTGGATTATTGTCTTACTTTTTATAGTGTGCTGTTTCCTGGTTGCTGCCTACATGTATCCGCCAGAAAGCACTTCAACATGTTCTCGCTTTTCCCCTCACGGTTGTGGTACTAGTACTAGTAATAAATATGATCTGCCTACACCTGAGTTTTCCCGGGCATTAAATGAAGACGAGATTCAATCTCGGATTGTTATCAATGAAATTCTGAAGTTCCATCCTGTTCAGACCAAGATCCCTAAAATTGCTTTTTTGTTTTTGACTCCGGGTTCGTTGCCCTTTGAGAAGCTCTGGCACATGTTCTTTCAGGGCCATGAGGGAAAATTCTCTATTTATGTACATGCATCGAAGGAAAAACCAGTACATGCCAGCCACTATTTTGCTGGCCGAGATATTCACAGTGAACCGGTAGAATGGGGGAGAATTTCTATGGTTGAGGCAGAAAGGAGACTTTTGGCAAGTGCACTTTTAGACCCTGATAATGAGCATTTCGTCTTGCTGTCTGAAAGTTGTATACCCGTGCGCCGCTTTGATTTTGTGTACAACTACTTGTTATTAACAAATGTCAGCTTTATTGACAGCTATGTGGACCCTGGTCCTCATGGAAATGGCAGGTATATAGAGCATATGTTGCCTGAAGTAGAAAAGAAGGATTTCCGAAAGGGATCACAGTGGTTCACATTGAAGCGACAGCATGCTGTTATAATCTTGGCAGACAGTCTATATTTTAGAAAATTCAAGTATTATTGCAGGCCAAATATGGAGGGCAATCGCAACTGCTATGCTGATGAACATTACTTGCCAACCATTTTTACTATGCTCGATCCACGTGGAATCGCAAACTGGTCGGTAACGTATGTTGACTGGTCTGAGAGAAAATGGCATCCGAAGTCATTCAGGGCTCGTGATATTACTTACCATCTCATGAAAAACATAGCATACATTGATGAGAGTCCACATTTTATTAGTGATGCAAAGAGATCGGTGGTGATTACGCCTTGCGTGTTGAAAGGTTTTAAACGATCTTGTTATCTATTTGCCCGGAAGTTTTACCCAGATACTCAAGATAAGTTGATGAAACTTTTCTCTAATTCAACATTATTCTGA 1197 0.4102 MKKELAWPQFIRNLLIMVVGSRNRSKLRGPTWIIVLLFIVCCFLVAAYMYPPESTSTCSRFSPHGCGTSTSNKYDLPTPEFSRALNEDEIQSRIVINEILKFHPVQTKIPKIAFLFLTPGSLPFEKLWHMFFQGHEGKFSIYVHASKEKPVHASHYFAGRDIHSEPVEWGRISMVEAERRLLASALLDPDNEHFVLLSESCIPVRRFDFVYNYLLLTNVSFIDSYVDPGPHGNGRYIEHMLPEVEKKDFRKGSQWFTLKRQHAVIILADSLYFRKFKYYCRPNMEGNRNCYADEHYLPTIFTMLDPRGIANWSVTYVDWSERKWHPKSFRARDITYHLMKNIAYIDESPHFISDAKRSVVITPCVLKGFKRSCYLFARKFYPDTQDKLMKLFSNSTLF 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g1531 398 Pfam Core-2/I-Branching enzyme 112 342 IPR003406 GO:0016020|GO:0016757
Lal8g1531 398 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN 8 396 - -
Lal8g1531 398 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 8 396 IPR044174 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g1531 Lal-Chr8 19634724 19642431 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g1531 - - gmx:100788165 683.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g1531 8 19634724 19642431 Lal8g1531 8 19634724 19642431 ECH
Lal8g1531 8 19634724 19642431 Lal25g1087 25 14192795 14200370 LSH