Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g1087 ATGAAGAAAGAACTTGCATGGCCACAATTCATAACAAATTTTATGATCATGGTTGTTGGATCAAGAAACAGATCACAATTAAAGAGACCAACTTGGATTATCCTCTTGATTTTTATAATCTGTATTTTCTTAATTGCTGTTTATATGTATCCACCACAAAGCACTTCAATGTGTTCTTTATTTTCATCTAAAGGTTGTGGTAGTAGTACTAGTACTAGTACTACATTTGATCTCCTTACACCGGAGTTTTCTCGGCCGTTAAATGAACAAGAGATTCAATCTCGGATTGTTATCAACGAAATTCTTAAGTTCTATCCTGTTCAGTCCAAGATCCCTAAAATTGCTTTTTTGTTTTTGACTCCGGGTTCCTTGCCCTTCGAGAAGCTCTGGCACATGTTCTTTCAGGGCCATGAGGGAAAATTCTCTGTTTATGTACATGCGTCGAAGGAAAAACCAGTACATGCCAGCCACTATTTCGTTGGCAGAGACATTCACAGCGAACCGGTAGAATGGGGGAGAATTTCTATGGTTGAGGCAGAAAGGAGACTTTTGGCAAGTGCACTTTTAGACCCTGATAATGAACATTTTGTCTTGCTATCTGAAAGTTGTATACCTGTGCGGCGCTTCGATTTTGTGTACAACTACCTGTTATTAACAAATGTCAGCTTTATTGACAGCTATGTGGATCCTGGTCCTCATGGAAATGGCAGGTATATAGAGCATATGTTGCCTGAAGTAGAAAAGAAGGATTTCCGAAAGGGTTCACAGTGGTTAACAATGAAGAGACAACATGCAATTATAATCATGGCAGACAGTCTCTATTTTAGAAAATTCAAGTATTATTGCAGGCCAAATATGGAAGGCAATCGCAACTGCTACGCCGATGAACATTACTTGCCAACCATTTTTACTATGCTCGATCCAGGTGGAATCGCGAAGTGGTCGGTAACATATGTCGATTGGTCTGAGAGAAAATGGCATCCAAAGTCATTCAGGGCTAGTGATATTACTTACCAACTCATGAAAAAGATAGCATACATTGATGAAAGCCTACATTTTATTAGTGATGCAAAGGGATCAGTGGAGATTACGCCATGCGCGTTGAATGGTTTTAAACGATCTTGTTATCTATTTGCGAGGAAGTTTTACCCGGAAACTCAAGATAAGTTGATGAAACTTTTCTCTAATTCAACAATATTCTAA 1203 0.3874 MKKELAWPQFITNFMIMVVGSRNRSQLKRPTWIILLIFIICIFLIAVYMYPPQSTSMCSLFSSKGCGSSTSTSTTFDLLTPEFSRPLNEQEIQSRIVINEILKFYPVQSKIPKIAFLFLTPGSLPFEKLWHMFFQGHEGKFSVYVHASKEKPVHASHYFVGRDIHSEPVEWGRISMVEAERRLLASALLDPDNEHFVLLSESCIPVRRFDFVYNYLLLTNVSFIDSYVDPGPHGNGRYIEHMLPEVEKKDFRKGSQWLTMKRQHAIIIMADSLYFRKFKYYCRPNMEGNRNCYADEHYLPTIFTMLDPGGIAKWSVTYVDWSERKWHPKSFRASDITYQLMKKIAYIDESLHFISDAKGSVEITPCALNGFKRSCYLFARKFYPETQDKLMKLFSNSTIF 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g1087 400 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN 8 398 - -
Lal25g1087 400 Pfam Core-2/I-Branching enzyme 114 344 IPR003406 GO:0016020|GO:0016757
Lal25g1087 400 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 8 398 IPR044174 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g1087 Lal-Chr25 14192795 14200370 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g1087 - - gmx:100788165 640.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g1087 25 14192795 14200370 Lal25g1087 25 14192795 14200370 ECH
Lal8g1531 8 19634724 19642431 Lal25g1087 25 14192795 14200370 LSH