Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g1036 ATGGGTACTTCAGAAGCACAAGCCCAATCTCTTCCGCTCCAAGACAGAGTCGCAATCGTCACCGGCTCCTCCCGCGGAATCGGTAGAGACATAGCGTTCCACCTGAGTTCACTTGGTGCTCGAATCGTCGTCAACTATACCTCCAACTCGGTCCAAGCCGACTCAGTCGTCACTAAGATCAACTCTGACGCCGATCGTCATGTCAATCTCCCACGAGCCATCGCCGTCCGCGGTGACGTGTCCGACCCGATCCATGTTAAGACCCTCTTCGACGAGGCGGAGCGTGTATTCAACTCGCCGGTTCATATCCTGGTCAACTCGGCCGGCGTTCTTATCAGCACATACCCGTCAATTTCCAATACTTCCTTGGAGGACTTCGATCGCACTTTCGGTGTAAATGCAAGAGGGGCATTTCTGTGCTGTAGAGAGGCAGCAAACCGTTTGGTACGTGGTGGTGGAGGTCGAATTATAATGTTAACTTCATCGATGGTGGCTGCACTGCGACCAAATTTTGGGGCATATGCAGCATCTAAAGCAGCTGTTGAGGCCATGATACATATTCTGGCAAAAGAGCTGAAGGGAACAGGAATTACAGCTAACTGTGTTGCACCTGGTCCAATCGCAACCGAAATGTTCTATGCCGGGAAGACAGAAGAGCAAGTGAAAGCGCCAATTTTAGAGTCTCCTCTCGGTAGGCTTGGTGAGACCAAGGATGTGGCTCCTTTGGTTGGGTTTTTGGCTACTGATTCTGGTGAGTGGGTTAACGGTCAGGTTATTCGTGTTAATGGCGGTTATGTTTAG 801 0.5094 MGTSEAQAQSLPLQDRVAIVTGSSRGIGRDIAFHLSSLGARIVVNYTSNSVQADSVVTKINSDADRHVNLPRAIAVRGDVSDPIHVKTLFDEAERVFNSPVHILVNSAGVLISTYPSISNTSLEDFDRTFGVNARGAFLCCREAANRLVRGGGGRIIMLTSSMVAALRPNFGAYAASKAAVEAMIHILAKELKGTGITANCVAPGPIATEMFYAGKTEEQVKAPILESPLGRLGETKDVAPLVGFLATDSGEWVNGQVIRVNGGYV 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g1036 266 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 99 110 IPR002347 -
Lal8g1036 266 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 162 IPR002347 -
Lal8g1036 266 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 174 193 IPR002347 -
Lal8g1036 266 PRINTS Glucose/ribitol dehydrogenase family signature 17 34 IPR002347 -
Lal8g1036 266 PRINTS Glucose/ribitol dehydrogenase family signature 99 110 IPR002347 -
Lal8g1036 266 PRINTS Glucose/ribitol dehydrogenase family signature 148 164 IPR002347 -
Lal8g1036 266 PRINTS Glucose/ribitol dehydrogenase family signature 174 193 IPR002347 -
Lal8g1036 266 PRINTS Glucose/ribitol dehydrogenase family signature 195 212 IPR002347 -
Lal8g1036 266 PRINTS Glucose/ribitol dehydrogenase family signature 229 249 IPR002347 -
Lal8g1036 266 Pfam Enoyl-(Acyl carrier protein) reductase 22 265 - -
Lal8g1036 266 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 161 189 IPR020904 GO:0016491
Lal8g1036 266 PANTHER NADPH-DEPENDENT ALDEHYDE REDUCTASE-LIKE PROTEIN, CHLOROPLASTIC-RELATED 3 266 - -
Lal8g1036 266 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 14 265 IPR036291 -
Lal8g1036 266 Gene3D - 2 266 - -
Lal8g1036 266 PANTHER SHORT-CHAIN DEHYDROGENASE/REDUCTASE 3 266 - -
Lal8g1036 266 CDD THN_reductase-like_SDR_c 13 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g1036 Lal-Chr8 8229250 8232353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g1036 13 264 Acyl Lipid Metabolism Gene Families AT1G24360 31.641 3.95e-28 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g1036 K00059 - gmx:100809416 393.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g1036 8 8229250 8232353 Lal10g0413 10 10156201 10157013 LSH