Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g1032 ATGAATGCACTAGCAGCCACCAATAGGAACTTTCGGTTGGCGAATCGGCTTCTCGGATTGGATTCGAAGCTTGAGAAAAGTTTGCTGATTCCATTCAGGGAAATTAAGGCAAGTGAAATTGTTGAATGTACCATACCTAAAGATGATGGATCATTGGTATCTTATGTTGGCTTTAGGGTTCAACATGATAATGCTAGAGGCCCTATGAAAGGAGGAATCAGATACCATCCTGAGGTTGACCCAGATGAAGTGAATGCTTTAGCACAACTAATGACATGGAAAACAGCAGTGGCAAATATACCATATGGTGGTGCCAAAGGAGGAATAGGGTGTAACCCAGAAGAGTTAAGTATTTCTGAGTTAGAAAGACTTACCAGAGTCTTTACTCAGAAAATTCATGATCTCATTGGAACTCATGTAGATGTGCCTGCACCTGATATGGGAACAGGACCACAGACTATGGCATGGATACTTGATGAATATTCAAAATTTCATGGCTATTCTCCTGCAGTAGTGACTGGAAAACCTATAGATCTTGGTGGATCTCTAGGTAGAGATGCAGCTACAGGACGTGGAGTCCTCTTTGCAACAGAAGCTTTGCTTAATGAATATGGGAAAAGTGTATCTGGACAAAGCTTTGTCATACAGGGATTTGGAAATGTGGGGTCCTGGGCTGCCCAATTAATTAGTGAGAAAGGTGGAAAAGTAGTTGCTGTGAGTGATATAACAGGAGCCATAAAGAACAGCAAAGGTATTGATATCTCAAGCCTAATCAAGCATTCAAGTGTGCACAAAGGAGTAAAAGGATTCCATGGTGCTGATCCAATTGATCCTAACTCAATATTGGTTGAAGACTGTGATGTTCTGGTCCCAGCAGCTCTTGGGGGAGTCATCAATAAGGAAAATGCAAATGAAATCAAAGCCAAATTTATTATTGAAGCAGCTAATCATCCAACTGACCCAGAAGCTGATGAGATTCTGAAGAAAAAAGGTGTTGTGATCCTCCCAGACATATATGCAAATTCAGGAGGTGTTACAGTTAGCTATTTTGAGTGGGTTCAGAACATCCAAGGGTTCATGTGGGATGAGGAGAAAGTGAACAATGAGTTAAAGAATTACATGACAAGAGGTTTTAAAGATGTGAAGGACATGTGCAGAACTCATGAATGTGATCTTCGAATGGGAGCATTCACCTTAGCAGTTAACCGTGTAGCAAGGGCCACTGTCCTTAGGGGTTGGGAAGCTTGA 1248 0.4159 MNALAATNRNFRLANRLLGLDSKLEKSLLIPFREIKASEIVECTIPKDDGSLVSYVGFRVQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPEELSISELERLTRVFTQKIHDLIGTHVDVPAPDMGTGPQTMAWILDEYSKFHGYSPAVVTGKPIDLGGSLGRDAATGRGVLFATEALLNEYGKSVSGQSFVIQGFGNVGSWAAQLISEKGGKVVAVSDITGAIKNSKGIDISSLIKHSSVHKGVKGFHGADPIDPNSILVEDCDVLVPAALGGVINKENANEIKAKFIIEAANHPTDPEADEILKKKGVVILPDIYANSGGVTVSYFEWVQNIQGFMWDEEKVNNELKNYMTRGFKDVKDMCRTHECDLRMGAFTLAVNRVARATVLRGWEA 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g1032 415 CDD NAD_bind_1_Glu_DH 180 406 IPR033922 GO:0016639
Lal8g1032 415 Gene3D Leucine Dehydrogenase, chain A, domain 1 40 179 - -
Lal8g1032 415 PANTHER BNAA05G37230D PROTEIN 1 409 - -
Lal8g1032 415 PIRSF Glu_DH 1 415 IPR014362 GO:0016639
Lal8g1032 415 PANTHER GLUTAMATE DEHYDROGENASE 1 409 - -
Lal8g1032 415 SMART ELFV_dehydrog_3 182 412 IPR006096 GO:0006520|GO:0016491
Lal8g1032 415 Gene3D - 180 414 - -
Lal8g1032 415 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 92 106 IPR006095 GO:0006520|GO:0016491
Lal8g1032 415 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 171 193 IPR006095 GO:0006520|GO:0016491
Lal8g1032 415 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 213 233 IPR006095 GO:0006520|GO:0016491
Lal8g1032 415 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 340 351 IPR006095 GO:0006520|GO:0016491
Lal8g1032 415 ProSitePatterns Glu / Leu / Phe / Val dehydrogenases active site. 100 113 IPR033524 -
Lal8g1032 415 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 7 182 IPR046346 -
Lal8g1032 415 Pfam Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 39 163 IPR006097 GO:0006520|GO:0016491
Lal8g1032 415 Pfam Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 180 412 IPR006096 GO:0006520|GO:0016491
Lal8g1032 415 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 180 413 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g1032 Lal-Chr8 8143468 8148823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g1032 1 300 EF-hand Containing Proteins AT5G07440 79.667 1.20e-180 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g1032 K00261 - gmx:547687 786.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g1032 8 8143468 8148823 Lal10g0427 10 10369984 10382442 LSH