Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0427 ATGAATAGATTTCTATTCTTGACGGTTGAGTGTACCATACCTAAAGATGATGGGTCGTTGGTATCTTATGTTGGCTTTCGGGTTCAACATGATAATGCAAGAGGCCCTATGAAAGGAGGAATCAGATACCATCCTGAGGTTGACCCAGATGAAGTGAATGCTTTAGCACAACTAATGACATGGAAAACAGCTGTAGCAAATATACCATATGGTGGTGCCAAAGGAGGAATAGGGTGTGACCCTGCAGAATTAAGCATTTCTGAGTTAGAAAGACTTACCAGAGTCTTTACTCAGAAAATTCATGATCTGATTGGAACTCACATAGATGTTCCTGCACCTGATATGGGAACAGGACCACAGACTATGGCATGGATATTAGATGAGTATTCCAAATTTCATGGCTACTCTCCTGCAGTAGTGACTGGAAAACCTATAGATCTTGGTGGATCTCTGGGTAGAGATGCAGCAACTGGGCGAGGAGTCCTCTTTGCAACAGAGGCATTGCTTAATGAGTATGGGAAGAGTGTATCTGGACAACGATTTGTCATACAGGGTTTTGGAAATGTGGGGTCTTGGGCAGCCCAATTAATTAGTGAGAAAGGTGGAAAAGTTGTTGCTGTGAGTGATGTAACTGGAGCCATAAAGAACAGCAAAGGTATTGACATCCCAAGCCTACTCAATCATTCCAGAGAGCACAAAAGGGTACAAGGATTCAATGGTGCTGATTCAGTTGAGCCAAATTCAATATTGGTTGAAGACTGTGATGTTCTTGTCCCAGCAGCTCTTGGGGGTGTCATCAATAGGGAAAATGCAAATGAAATCAAAGCCAAATTTATTATAGAAGCAGCTAATCACCCAACTGACCCAGAGGCTGATGAGATTCTGAAGAAAAAAGGTGTTGTGATCCTCCCTGACATATATGCAAATTCAGGAGGCGTTACAGTCAGCTACTTTGAATGGGTTCAGAACATTCAAGGGTTCATGTGGGATGAGGAGAAAGTGAACAATGAGCTAAAGACCTACATGACCAAGGGCTTCAAAGATGTGAAGGAAATGTGCAAAACTTATGCATGTGATCTTCGTATGGGAGCATTCACTTTGGCAGTTAACCGTGTAGCACGAGCCACTGTTCTTAGAGGTTGGGAAGCTTAA 1152 0.4271 MNRFLFLTVECTIPKDDGSLVSYVGFRVQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCDPAELSISELERLTRVFTQKIHDLIGTHIDVPAPDMGTGPQTMAWILDEYSKFHGYSPAVVTGKPIDLGGSLGRDAATGRGVLFATEALLNEYGKSVSGQRFVIQGFGNVGSWAAQLISEKGGKVVAVSDVTGAIKNSKGIDIPSLLNHSREHKRVQGFNGADSVEPNSILVEDCDVLVPAALGGVINRENANEIKAKFIIEAANHPTDPEADEILKKKGVVILPDIYANSGGVTVSYFEWVQNIQGFMWDEEKVNNELKTYMTKGFKDVKEMCKTYACDLRMGAFTLAVNRVARATVLRGWEA 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0427 383 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 60 74 IPR006095 GO:0006520|GO:0016491
Lal10g0427 383 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 139 161 IPR006095 GO:0006520|GO:0016491
Lal10g0427 383 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 181 201 IPR006095 GO:0006520|GO:0016491
Lal10g0427 383 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 308 319 IPR006095 GO:0006520|GO:0016491
Lal10g0427 383 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 148 381 IPR036291 -
Lal10g0427 383 CDD NAD_bind_1_Glu_DH 148 374 IPR033922 GO:0016639
Lal10g0427 383 PIRSF Glu_DH 3 383 IPR014362 GO:0016639
Lal10g0427 383 PANTHER BNAA05G37230D PROTEIN 7 377 - -
Lal10g0427 383 Pfam Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 8 131 IPR006097 GO:0006520|GO:0016491
Lal10g0427 383 Pfam Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 148 380 IPR006096 GO:0006520|GO:0016491
Lal10g0427 383 Gene3D Leucine Dehydrogenase, chain A, domain 1 6 147 - -
Lal10g0427 383 PANTHER GLUTAMATE DEHYDROGENASE 7 377 - -
Lal10g0427 383 ProSitePatterns Glu / Leu / Phe / Val dehydrogenases active site. 68 81 IPR033524 -
Lal10g0427 383 Gene3D - 148 382 - -
Lal10g0427 383 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 7 150 IPR046346 -
Lal10g0427 383 SMART ELFV_dehydrog_3 150 380 IPR006096 GO:0006520|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0427 Lal-Chr10 10369984 10382442 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0427 1 268 EF-hand Containing Proteins AT5G07440 77.612 7.83e-157 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0427 K00261 - gmx:547687 730.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g1032 8 8143468 8148823 Lal10g0427 10 10369984 10382442 LSH