Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0995 ATGTATCTTCATCGCCACGTACTCACCAAACCCTCCTCCTCCTTCCTCCTCCACCGCCACCTCTCCAACTCCGCCGCCGCCGTCCTCCACCACCACGAACTCCCGGAGCTTCAACCTCTAACGTACCTCCCAGGCTTCCCTCGCCCCAACCCTAAACACGACGAGACGATACTAGCGATCCCACGCGCCATCTCCGGAAAAAACATATCGGAAAAGGAGAGGAAGGTTGGGCGCGTGCCGAGCATCGTCTTCGAGCAAGAAGATGGACAACATGGCGGAAACAAACGACTCATTTCCGTCCGTACTAATCAGATCAAGAAGCTCGTTAATCACCTCGGCCAATCATTCTTCCTCTCACGACTCTTCGAACTCGAAGTTCGCTCCGATTTGGAGTCCGAAGAGGTCGTTGAGAAGGTTCGGGTTTTGCCAAGGAAGTTGTATCAACGAAAGATTATTATAGGTGGTAATCTTCATATTAAAGCAAGCACAGACATACCATTGAATGTCACTTTTATAAGGGCTCCATCAAATGCTTTGTTGAAAGTCGACGTTCCTCTTGTATTCATAGGAGAAGATGTATCCCCTGGACTGAAGAAAGGTGCTTCTTTGAATACCATAAAACGGACTGTTAAGTACCTATGCCCTGCCGACATTATCCCTCCATATATCGAGGTGGATTTAAGTGAGTTGGACGTAGGCCAGAAGTTGGTTATGGGAGATCTCATTGTTCATCCTGCATTAAAACTTATTCAGTCAAGAGATGAAGCAGTTTGTAAAATCATGGGTCAAAGGGTTTCTGAAACACAACCAAAGAAATCTAAGTAA 825 0.4703 MYLHRHVLTKPSSSFLLHRHLSNSAAAVLHHHELPELQPLTYLPGFPRPNPKHDETILAIPRAISGKNISEKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIKKLVNHLGQSFFLSRLFELEVRSDLESEEVVEKVRVLPRKLYQRKIIIGGNLHIKASTDIPLNVTFIRAPSNALLKVDVPLVFIGEDVSPGLKKGASLNTIKRTVKYLCPADIIPPYIEVDLSELDVGQKLVMGDLIVHPALKLIQSRDEAVCKIMGQRVSETQPKKSK 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0995 274 SUPERFAMILY Ribosomal protein L25-like 56 269 IPR011035 GO:0006412
Lal8g0995 274 CDD Ribosomal_L25_TL5_CTC 56 173 IPR029751 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Lal8g0995 274 Pfam Ribosomal protein TL5, C-terminal domain 180 262 IPR020057 -
Lal8g0995 274 PANTHER BNAA01G13300D PROTEIN 34 273 - -
Lal8g0995 274 Gene3D Ribosomal protein L25, beta domain 177 269 IPR037121 -
Lal8g0995 274 Pfam Ribosomal L25p family 59 135 IPR029751 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Lal8g0995 274 PANTHER RIBOSOMAL PROTEIN L25/GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEIN 34 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0995 Lal-Chr8 7737707 7742626 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0995 K02897 - gmx:100779285 382.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0995 8 7737707 7742626 Lal10g0478 10 11265145 11271186 LSH