Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0478 ATGTATCTCACGCGCCTCATCCTCACCCGACCCTCCTCCTCCTTCCTTCTCCTCCGCCACTTCTCACACTCCGCCACCGCCGCCGTCCACGACGAACTCCCAGACCTCCAGCCACTAACTTACCTCCCAGGCTTCCCCCGTCCCAACCCGAAACACGATGAGACAATCCTCGCTATCCCACGCGCCATATCCGGAAAAAACATATCCGAAAAGGAGAGGAAAGCTGGGCGCGTGCCGAGCATCGTATTTGAGCAAGAAGATGGAGAGCACGGCGGAAATAAGCGCCTTATTTCCGTCCGTACTGATCAGATCAAGAAACTTGTTAACCATCTCGGCCATTCCTTCTTTCTCTCTCGACTCTTCAAACTCGAAGTCCGCTCTGACTTCGAGTCCGAAGAGATCGTTGAGAAAGTTCGGGTTTTGCCAAGGAAGATTCATATTAAAGCAAGCACAGACAAACCATTGAATGTCACTTTTATAAGGGCCCCATCAAATGCTTTGTTGAAAGTTGACATTCCTCTTGTATTCATAGGAGACGATGTATCCCCTGGAATGAAGAAAGGTGCTTCTTTGAATACCATCAAAAGAACTGTTAAGTACCTATGCCCGGCCGACATTATCCCTCCATATATTGAGGTGGATTTGAGTGAGTTGGACGTTGGCCAGAAAATTGTTATGGGAGACCTCATTGTTCATCCTGCATTAAAACTTCTTCAGTCAAAAGATGAAGCTGTTTGTAAAATTATGGGCCAAAGGGTTTCTGAAACACAACCGAAGAAATCAAAGTAA 789 0.4728 MYLTRLILTRPSSSFLLLRHFSHSATAAVHDELPDLQPLTYLPGFPRPNPKHDETILAIPRAISGKNISEKERKAGRVPSIVFEQEDGEHGGNKRLISVRTDQIKKLVNHLGHSFFLSRLFKLEVRSDFESEEIVEKVRVLPRKIHIKASTDKPLNVTFIRAPSNALLKVDIPLVFIGDDVSPGMKKGASLNTIKRTVKYLCPADIIPPYIEVDLSELDVGQKIVMGDLIVHPALKLLQSKDEAVCKIMGQRVSETQPKKSK 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0478 262 Pfam Ribosomal L25p family 58 159 IPR029751 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Lal10g0478 262 PANTHER RIBOSOMAL PROTEIN L25/GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEIN 19 261 - -
Lal10g0478 262 SUPERFAMILY Ribosomal protein L25-like 55 257 IPR011035 GO:0006412
Lal10g0478 262 Gene3D Ribosomal Protein L25; Chain P 55 162 IPR020056 -
Lal10g0478 262 CDD Ribosomal_L25_TL5_CTC 55 161 IPR029751 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Lal10g0478 262 Pfam Ribosomal protein TL5, C-terminal domain 168 250 IPR020057 -
Lal10g0478 262 Gene3D Ribosomal protein L25, beta domain 165 257 IPR037121 -
Lal10g0478 262 PANTHER BNAA01G13300D PROTEIN 19 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0478 Lal-Chr10 11265145 11271186 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0478 K02897 - gmx:100809143 392.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0995 8 7737707 7742626 Lal10g0478 10 11265145 11271186 LSH