Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0909 ATGGATACGGTGTCTCTATCAAACGATGCCGTTTCACTTTTGAAGGACAAGGAGTCAATGGTTGACCCCTTCTTGGTCGAGGCTCTTCAGAATCCTCGTCACCGTCTCACTATTTTGCGGATGGAGTTGGATATCCAGAGGTTTCTGAATAATGCTGATCAGCAGCATTTTGAGTTCCAACATTTTCCTTCTTCCTATCTCCGTCTGGCTGCACATCGTGTTGCTCAACACTACGGTATGCAAACCATGGTTCAGGATATTGGCTTAGATGGTCAGGGAAGTAAAATTCTGGTGAGAAAGCTACCAGAAAGCAAGTATCCTATGGTTCGCTTATCTGAAATACCTGTGAAACAGTTAGAAAATGATAAATCTGAGCATAAAAAAATTGTCCTCAAACCCAGGCCTAATAAAAATAGTTTCAATGAAGCCAATGAAGCTGGTAAAAAAGGAAATCCTTGGAGAAGTGTGGAAGAGAGGATGGAAGAATATGATCGTGCACGGGCACGCATATTTAGTGGCTCTAGAAGCTTTGATTCAGGTGAAGTGCAATCCTTGGTTCCAGTGGATGGGAAGGTATCCTTTATGAGCAAGGACGAGAATGAAACAAGCAAGAACCCTGTGGCTGATTCAGAGAGAAGCTTAAGTGTTAGGGATATTAATTTTACTCGAGTTGCCATTTTCAGAGACAGGGAAAAGGATCGTACCGATCCAGATTATGATCGAAGCTATGGAAGGTATGTTAGGAGTATTCCAGCCCCTGTGGTTAACTTGGTGCCTATGAATTTTCAAAAAGCTCAACCATCATTTGCTCAATATGATACTACTTTTAATCAGTTGGCTCCGATGCCACAAACTCAACCTTCACTTGGTTATGGACCTCCTGCAAGCCCGATAATGAGTCCTTTTTGTGCCACGGGATTGAATCAGACACCTAGGGAGGGTGCTTACCTACAGTGGCCAAGTCCTGCAATGATGTATGCACATTCATATGACCAATTTAGACATGCTGTTTTCCGGGTTCCATTTGGTCAACAACCCTTGAGCTTTGACTATTCACAGAATTACTAG 1068 0.4288 MDTVSLSNDAVSLLKDKESMVDPFLVEALQNPRHRLTILRMELDIQRFLNNADQQHFEFQHFPSSYLRLAAHRVAQHYGMQTMVQDIGLDGQGSKILVRKLPESKYPMVRLSEIPVKQLENDKSEHKKIVLKPRPNKNSFNEANEAGKKGNPWRSVEERMEEYDRARARIFSGSRSFDSGEVQSLVPVDGKVSFMSKDENETSKNPVADSERSLSVRDINFTRVAIFRDREKDRTDPDYDRSYGRYVRSIPAPVVNLVPMNFQKAQPSFAQYDTTFNQLAPMPQTQPSLGYGPPASPIMSPFCATGLNQTPREGAYLQWPSPAMMYAHSYDQFRHAVFRVPFGQQPLSFDYSQNY 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0909 355 CDD R3H_encore_like 34 100 - -
Lal8g0909 355 ProSiteProfiles R3H domain profile. 35 102 IPR001374 GO:0003676
Lal8g0909 355 PANTHER CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN 7 354 - -
Lal8g0909 355 PANTHER OS05G0411600 PROTEIN 7 354 - -
Lal8g0909 355 SUPERFAMILY R3H domain 11 122 IPR036867 GO:0003676
Lal8g0909 355 ProSiteProfiles SUZ domain profile. 105 175 IPR024771 -
Lal8g0909 355 SMART R3H_4 19 101 IPR001374 GO:0003676
Lal8g0909 355 MobiDBLite consensus disorder prediction 134 155 - -
Lal8g0909 355 Gene3D - 11 136 IPR036867 GO:0003676
Lal8g0909 355 Pfam SUZ domain 126 174 IPR024771 -
Lal8g0909 355 Pfam R3H domain 37 86 IPR001374 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0909 Lal-Chr8 6752227 6755778 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0909 - - gmx:100814835 578.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0909 8 6752227 6755778 Lal10g0589 10 13570271 13574475 LSH