Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0889 ATGGCAATCCTTAAGATAACCAAAAAACACCACAACCGTTTCAACAACCCTTTCCCTTCTTCTGCTTCAACCACCATACCTTATGTCCAAGGCTCTCTCTTCATCAACTCAAAAACATTATCTTTTGATCAAACCTTCTCAATTGGCAATGATTTTCAGCTTTCTTGGACCTCAAACAATGGAGGGTACCTCTCAATTTGTCATCTTTCTAATGCAAATAGACCCATATGGTCTTCCATTCCAGGACATGCTTTTGTCTCAGCTGCAATGATTGACACAGAGATAGAAGAGAGTAGAGGATCATTTCTTATCAAAGATAGAGATATTCACTTGGTTTGTAATAACCAAACCATTGATGATATAAGGGTGATCAATCATTTGGAACATGAAAATGCAGAAAATTTATCATTTGACCCGAAAATGGTGACAAATGAAGAGAACCAGCTTCCTACTTTGTTGATCACAGGAAGGCTTTTCAATATGACTAAGAAGAATAGAAGGTTTCAAAAGCATGGAATTCAAGGTAATATTCAGTTTGAAGCAAAAAGACCTTCTGTGTATGCAAGGTATTGGGTTTTGTTCAATCAGAAAACTAAACATCAGGTTGGTTTTCAAGTGAAGGTTGAGAAACCAAACTTCATCTCAAAAAATAAGGTATCTCCTAAAGCTTCAGAGGGAGTATACCTTGGCTTTAAGAGGAGGGTGAGTAATAGAAAAAAGAGGCTTGGTTGGTTTTGGTATCTTTCAAGGCCAAGAGGGTTTGTCTTGGTTTCCTCAGTAGAGGAAGAAATAGAGGACTTGAATATCCCAAAATCAGAAGAATTCAACAGGGTTTGGTTGACATATTCAAGTGATGAGAATGAGAGGTTTTATGGCTTTGGGGAGCAGTTTTCACACATGAATTTCAAAGCCAAAAGAGTGCCTATCTTTGTTCAAGAACAAGGTATCGGTAGAGGAGATCAGCCTATTACCTTAGCTGCTAACTTGATTAGTTCCAGGGCAGGAGGTGATTGGAGTACAACTTATGCCCCTTCTCCATTCTACATGACATCGAAAATGAGGTCTCTCTACCTTGAAGGATATGATTATACAATCTTCGATCTTACAAGACTTGACAGAGTACAGATACAGATACATGGAAATTCAGCTAAAGGGAGGATATTGCATGGGAACTCACCTTGTGAACTGATTGAACATTTCACAGAAACCATTGGAAGGCTACCTGAGCTTCCAGAGTGGATAATATCTGGTGCTATAGTTGGGATGCAGGGTGGCACGGATGCGGTGCGTCGTATTTGGGATGAACTAAAGACTTATGATGTTCCTGTCTCAGCATTTTGGTTGCAGGATTGGGTAGGACAGAGAGAAACATTAATTGGTTCACAACTCTGGTGGAATTGGGAAGTGGATGAAGAAAGATATTGGGGATGGAAGGAACTTATCAAAGATCTTAGTAATCAGCATGTTAAAGTTATGACATATTGCAATCCTTGTCTCGCTCCGGCCGATGAGAAGCCAAACAAAAGAAGAAACCTGTATGAGGAGGCAAAACAGTTGGACATTTTGGTGAAAGACAGTGAAGGCAATCCATACATGGTTCCAAATACGGCTTTTGATGTAGGAATGCTAGATCTAACACACCCTAAAACATCAACTTGGTTCAAGCAGATACTACTAGAAATGGTAGATGATGGAGTTAGAGGATGGATGGCTGATTTTGGTGAAGGCCTTCCTGTTGATGCTGTTCTATATTCAGGTGAAGATCCTGTTTCAGCCCATAACAGATACCCAGAACTATGGGCCAAAATCAACAGAGAGCTTGTGGAAGAATGGAAAAGCAAGTCCTTGGACAGAGAGAAAGAAGAACAAGAAGATTCATTGGTTTTCTTCATGAGGGCAGGTTTTAGAGATAGTCCAAAATGGTGTATGTTGTTTTGGGAAGGAGACCAAATGGTAAGTTGGCAAACAAATGATGGAATAAAGAGTTCTGTGGTTGGCCTTTTAAGCAGTGGAATTTCTGGCTATGCTTTTAATCACAGTGATATTGGAGGCTATTGTACAGTAAACCTGCCTATAGTTAAATACAGAAGAAGTCAAGAATTGCTTTTAAGATGGATGGAGCTAAATTCTTTCACCCCGGTATTCCGTACGCATGAAGGGAACAAACCATCATGCAATAGCCAGTTTTACTCAAACAAAGAAACTCTATCACACTTTGCTCGAACTGCAAAAATATACGCAGCATGGAAATTTTACCGAATTCAACTAGTGAAGGAAGCTTCACAGAAAGGACTTCCTGTATGCAGACACTTATTCCTCCATTACCCGAATGATGAACATGTGCATCACTTGAGTTATCAGCAGTTCTTGGTTGGTTCTGAGTTCCTAGTGGTTCCTGTACTTGACAAAGGAAAGAAGAAAGTTAAGGCCTATTTTCCTTTGGGAGAGAGTAGTAGTTGGCTACATATTTGGACAGGGAAACTATTTTCCAAAGAAGGAATAGAAGAATGGGTAGATGCTCCAATAGGATATCCTGCTGTATTTGTTAAGGTTGGTTCCCTTATTGGAGAAACCTTTTTGAATAACCTTGTAAATTTTGGCATTCTTTAA 2610 0.3954 MAILKITKKHHNRFNNPFPSSASTTIPYVQGSLFINSKTLSFDQTFSIGNDFQLSWTSNNGGYLSICHLSNANRPIWSSIPGHAFVSAAMIDTEIEESRGSFLIKDRDIHLVCNNQTIDDIRVINHLEHENAENLSFDPKMVTNEENQLPTLLITGRLFNMTKKNRRFQKHGIQGNIQFEAKRPSVYARYWVLFNQKTKHQVGFQVKVEKPNFISKNKVSPKASEGVYLGFKRRVSNRKKRLGWFWYLSRPRGFVLVSSVEEEIEDLNIPKSEEFNRVWLTYSSDENERFYGFGEQFSHMNFKAKRVPIFVQEQGIGRGDQPITLAANLISSRAGGDWSTTYAPSPFYMTSKMRSLYLEGYDYTIFDLTRLDRVQIQIHGNSAKGRILHGNSPCELIEHFTETIGRLPELPEWIISGAIVGMQGGTDAVRRIWDELKTYDVPVSAFWLQDWVGQRETLIGSQLWWNWEVDEERYWGWKELIKDLSNQHVKVMTYCNPCLAPADEKPNKRRNLYEEAKQLDILVKDSEGNPYMVPNTAFDVGMLDLTHPKTSTWFKQILLEMVDDGVRGWMADFGEGLPVDAVLYSGEDPVSAHNRYPELWAKINRELVEEWKSKSLDREKEEQEDSLVFFMRAGFRDSPKWCMLFWEGDQMVSWQTNDGIKSSVVGLLSSGISGYAFNHSDIGGYCTVNLPIVKYRRSQELLLRWMELNSFTPVFRTHEGNKPSCNSQFYSNKETLSHFARTAKIYAAWKFYRIQLVKEASQKGLPVCRHLFLHYPNDEHVHHLSYQQFLVGSEFLVVPVLDKGKKKVKAYFPLGESSSWLHIWTGKLFSKEGIEEWVDAPIGYPAVFVKVGSLIGETFLNNLVNFGIL 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0889 869 CDD GH31_N 275 405 - -
Lal8g0889 869 SUPERFAMILY Galactose mutarotase-like 268 393 IPR011013 GO:0003824|GO:0005975|GO:0030246
Lal8g0889 869 Pfam Glycosyl hydrolases family 31 388 855 IPR000322 GO:0004553|GO:0005975
Lal8g0889 869 Gene3D glycosyl hydrolase (family 31) 234 388 - -
Lal8g0889 869 Gene3D Glycosidases 392 797 - -
Lal8g0889 869 SUPERFAMILY Glycosyl hydrolase domain 766 850 - -
Lal8g0889 869 SUPERFAMILY (Trans)glycosidases 396 764 IPR017853 -
Lal8g0889 869 CDD GH31_glucosidase_YihQ 405 743 IPR044112 -
Lal8g0889 869 PANTHER SULFOQUINOVOSIDASE 29 866 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0889 Lal-Chr8 6520555 6525897 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0889 280 841 Glycoside Hydrolase AT3G45940 23.967 5.98e-24 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0889 - - gmx:100779005 1544.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0889 8 6520555 6525897 Lal10g0617 10 13935726 13942106 LSH