Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0617 ATGACAATCCTAAAGATAACCAAAAAACATCATAAACATTTCAACAACCCTTTCCCTTCTTCTGCTTCAACCACTATCCCTTATATCCAAGGCTCTCTCTTCTTCAATTCCAAAACATTGTCTTCTGATCAAACCTTCTCAATTGGCAATGATTTTCACCTTTCTTGGTCCTCCAACAATGGAGGGTACCTCTCAGTTTCTCATAATTCTCATGCAAATACAACCATATGGTCTTCCATTCCAGGACAAGCTTTTGTCTCAGCTGCTATGGTTGACACAGAGGTAGAAGAAAGTAGAGGGTCATTTCTTATCAAAGATAGAGATGTTCACTTGGTTTGTAATAACCAAATCATTGATGATATAAGAGTCATCAATCATTTGGAACATGAAGTTTCAGAAACTTTGTTACTTGACCAGAAAATGATTAGAGAAGAGAACCAGCTTCCTACATTGTTGATCACAGGAAGGCTTTTCAATATGACTAAGAATAACAGAACTTTTCAGAAGCTTGGATTTCAATCAAATATGCACTATGGTGCAAAAGGGTCTTCTGTGTATGCAAGGTATTGGGTTTTGTTCAATCAGAAAACTAACCATCAACTTGGTTTTCAAGTTAAGGTTGAGAAACCAAACTTCATCTCAAGAAAGCATGAATTTCCAACAGCCTCAGGAGGAGTATACCTTGGCTTTAAGAGGAGGCTGGGTAATATAAAAAAGAAGCTTGGTTTGTGTTGGTACTTTTCAAGGCCAAGAGGGTTTGTCTTGGTTTCCTCAGTAGAGGAAGAAATAGGGAACTTAGATATCTCAGAATCAGAAGAATTCAATAGGGTTTGGTTAACATATTCAAGTGATGAGAATGAGAAGTTTTATGGCTTCGGGGAGCAGTTTTCTTACATGAATTTCAAAGGCAAAAGAGTGCCTATCTTTGTTCAAGAACAAGGTATTGGTAGAGGAGATCAACCTATTACCTTGGCTGCTAACTTGGTTAGTTACAGGGCAGGAGGTGACTGGAGTACAACTTATGCTCCTTCTCCATTCTACATGACATCGAAAATGAGGTCTGTCTACCTTGAAGGATACGAATATACTATTTTCGATCTAACAAAACCTGACAGAGTACAAATACAGGTACATGGAAATTCAGTTGAAGGGAGGATATTACATGGGAACTCACCTTGTGAACTGATTGAACATTTCACAGAAACCATTGGAAGGCTACCTGAGCTTCCGGAGTGGATAATATCCGGTGCTATAGTTGGAATGCAGGGTGGCACTGATGCTGTGCGGTGTATTTGGGATGAACTAAGGACTTACGATGTTCCTGTCTCGGCATTTTGGTTGCAGGATTGGGTAGGGCAGAGAAAAACATTAATTGGCTCACAACTCTGGTGGAATTGGGAAGTGGATGAACAAAGGTATTGGGGGTGGAAGGAACTTATCAAAGATCTTTGCACTCAGCACATTAAAGTTATGACTTACTGCAATCCTTGTCTAGCTCCGGCTGATGAGAAGCCAAACACAAAGAGAAACCTCTTTGAGGAGGCAAAGCAGTTGGACATTTTGGTGAAAGACGGTAACGGAAATCCATACATGGTTCCAAATACAGCTTTTCATGTAGGAATGCTTGATCTAACACACCCTAAAACAGCAAATTGGTTTAAGCAGATACTGCTAGAAATGGTAGAAGATGGAGTTAGAGGATGGATGGCTGATTTTGGTGAAGGCCTTCCTGTTGATGCTGTTCTATATTCAGGTGAAGATCCTATTTCAGCTCATAACAGATATCCAGAACTATGGGCCAGAATCAACAGAGAGGTAGTGGAAGAATGGAAAAGCAACAACTTGGACAAGAAGAAAGATGAGCAAGAAGAGAACTTGGTTTTCTTCATGAGGGCTGGTTATAGAGATAGCCCAAAATGGTGTATGCTATTTTGGGAAGGAGACCAAATGGTAAGTTGGCAAAGAAATGATGGAATAAAGAGTTCTGTGGTTGGCCTACTTAGCAGTGGAATTTCAGGCTATGCCTTTAATCACAGTGACATTGGAGGCTATTGTACAGTAAATATACCCATACTTAAATATACAAGAAGTCAAGAATTGCTTTTAAGATGGATGGAGCTAAACTCTTTCACCACAGTATTCCGCACTCATGAAGGAAACAAACCATCATGCAACAGCCAGTTTTACTCAAACAAAGAAACTCTATCACACTTTGCTCGAACCGCGAAAATATATGCAGCATGGAAATTTTACAGAGTTCAACTAGTAAAGGAAGCTGCACAGAAAGGATTACCTATATGCAGACACCTATTTCTCCATTACCCAAAGGATGAAAATGTGCATCAGTTGAGTTATGAGCAGTTTTTGGTTGGTTCTGAGTTCCTTGTGGTGCCTGTTCTTGACAAAGGAAAGAAGAAAGTTAAAGCTTATTTTCCATTGGGAGAGAGTAGTAGTTGGCTACATATATGGACAGGGAAAGTATTTACCAAACAAGGAATAGATGAATGTGTAGATGCTCCAATAGGGTATCCTGCTGTATTTGTTAAGGTTGGTTCCCTTGTTGGAGAAACCTTTATGAACAACCTAGTAACTTTTGGAATTCTTTAA 2607 0.3951 MTILKITKKHHKHFNNPFPSSASTTIPYIQGSLFFNSKTLSSDQTFSIGNDFHLSWSSNNGGYLSVSHNSHANTTIWSSIPGQAFVSAAMVDTEVEESRGSFLIKDRDVHLVCNNQIIDDIRVINHLEHEVSETLLLDQKMIREENQLPTLLITGRLFNMTKNNRTFQKLGFQSNMHYGAKGSSVYARYWVLFNQKTNHQLGFQVKVEKPNFISRKHEFPTASGGVYLGFKRRLGNIKKKLGLCWYFSRPRGFVLVSSVEEEIGNLDISESEEFNRVWLTYSSDENEKFYGFGEQFSYMNFKGKRVPIFVQEQGIGRGDQPITLAANLVSYRAGGDWSTTYAPSPFYMTSKMRSVYLEGYEYTIFDLTKPDRVQIQVHGNSVEGRILHGNSPCELIEHFTETIGRLPELPEWIISGAIVGMQGGTDAVRCIWDELRTYDVPVSAFWLQDWVGQRKTLIGSQLWWNWEVDEQRYWGWKELIKDLCTQHIKVMTYCNPCLAPADEKPNTKRNLFEEAKQLDILVKDGNGNPYMVPNTAFHVGMLDLTHPKTANWFKQILLEMVEDGVRGWMADFGEGLPVDAVLYSGEDPISAHNRYPELWARINREVVEEWKSNNLDKKKDEQEENLVFFMRAGYRDSPKWCMLFWEGDQMVSWQRNDGIKSSVVGLLSSGISGYAFNHSDIGGYCTVNIPILKYTRSQELLLRWMELNSFTTVFRTHEGNKPSCNSQFYSNKETLSHFARTAKIYAAWKFYRVQLVKEAAQKGLPICRHLFLHYPKDENVHQLSYEQFLVGSEFLVVPVLDKGKKKVKAYFPLGESSSWLHIWTGKVFTKQGIDECVDAPIGYPAVFVKVGSLVGETFMNNLVTFGIL 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0617 868 PANTHER SULFOQUINOVOSIDASE 29 865 - -
Lal10g0617 868 Gene3D - 797 849 IPR013780 -
Lal10g0617 868 CDD GH31_glucosidase_YihQ 404 742 IPR044112 -
Lal10g0617 868 Pfam Glycosyl hydrolases family 31 387 853 IPR000322 GO:0004553|GO:0005975
Lal10g0617 868 SUPERFAMILY Glycosyl hydrolase domain 765 849 - -
Lal10g0617 868 CDD GH31_N 274 404 - -
Lal10g0617 868 Gene3D glycosyl hydrolase (family 31) 236 389 - -
Lal10g0617 868 Gene3D Glycosidases 391 796 - -
Lal10g0617 868 SUPERFAMILY (Trans)glycosidases 395 763 IPR017853 -
Lal10g0617 868 SUPERFAMILY Galactose mutarotase-like 275 392 IPR011013 GO:0003824|GO:0005975|GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0617 Lal-Chr10 13935726 13942106 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0617 279 840 Glycoside Hydrolase AT3G45940 23.383 1.92e-22 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0617 - - gmx:100779005 1500.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0889 8 6520555 6525897 Lal10g0617 10 13935726 13942106 LSH